RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GDPD5Q8WTR4 605 aa17.49■□□□□ 0.39
LIMS3-203ENST00000480744 PCDHA6Q9UN73 950 aa17.49■□□□□ 0.39
LIMS3-203ENST00000480744 PCDHA8Q9Y5H6 950 aa17.49■□□□□ 0.39
LIMS3-203ENST00000480744 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 TNFRSF10AO00220 468 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 KCNA2P16389 499 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 POU3F3P20264 500 aaPredicted RBP17.48■□□□□ 0.39
LIMS3-203ENST00000480744 NAPAP54920 295 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 TFF2Q03403 129 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 MTMR1Q13613 665 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 RTN1Q16799 776 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 SEPT8Q92599 483 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 EHMT1Q9H9B1 1298 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
LIMS3-203ENST00000480744 NAP1L2Q9ULW6 460 aaPredicted RBP17.48■□□□□ 0.39
LIMS3-203ENST00000480744 NLRC5Q86WI3 1866 aa17.48■□□□□ 0.39
LIMS3-203ENST00000480744 LINC01553A4QN01 128 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 ZBTB43O43298 467 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 CAND2O75155 1236 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 CDC45O75419 566 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 MARK3P27448 753 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 PLEKHG4Q58EX7 1191 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 DHX32Q7L7V1 743 aaKnown RBP17.47■□□□□ 0.39
LIMS3-203ENST00000480744 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
LIMS3-203ENST00000480744 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 UBIAD1Q9Y5Z9 338 aa17.47■□□□□ 0.39
LIMS3-203ENST00000480744 GSTTP1A0A1W2PQM5 241 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 GOLGA8AA7E2F4 631 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 GOLGA8BA8MQT2 603 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 FGD1P98174 961 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 EXOSC10Q01780 885 aaKnown RBP17.46■□□□□ 0.39
LIMS3-203ENST00000480744 PPFIA1Q13136 1202 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 ADCK5Q3MIX3 580 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 RASEFQ8IZ41 740 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 SEPT1Q8WYJ6 367 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 GLG1Q92896 1179 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 PGBD1Q96JS3 809 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 UHRF1Q96T88 793 aaPredicted RBP17.46■□□□□ 0.39
LIMS3-203ENST00000480744 OSBPL7Q9BZF2 842 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 JADE2Q9NQC1 790 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 LOXHD1Q8IVV2 1947 aa17.46■□□□□ 0.39
LIMS3-203ENST00000480744 NRCAMQ92823 1304 aa17.46■□□□□ 0.38
LIMS3-203ENST00000480744 KLF18A0A0U1RQI7 1052 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 LPXNO60711 386 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 UPP2O95045 317 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 ADCY7P51828 1080 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 ERVK-21P61565 698 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 KRT32Q14532 448 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 ERAP1Q9NZ08 941 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
LIMS3-203ENST00000480744 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
LIMS3-203ENST00000480744 KCNQ1P51787 676 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 ADAM17P78536 824 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 GRIK4Q16099 956 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 PPP1R18Q6NYC8 613 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 RUFY4Q6ZNE9 571 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 JPH1Q9HDC5 661 aaPredicted RBP17.44■□□□□ 0.38
LIMS3-203ENST00000480744 RIC8AQ9NPQ8 531 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 NCOR1O75376 2440 aa17.44■□□□□ 0.38
LIMS3-203ENST00000480744 STXBP3O00186 592 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 MAFGO15525 162 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 IGBP1P78318 339 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
LIMS3-203ENST00000480744 TAF2Q6P1X5 1199 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 FBXO22Q8NEZ5 403 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 NECAB3Q96P71 396 aaPredicted RBP17.43■□□□□ 0.38
LIMS3-203ENST00000480744 YME1L1Q96TA2 773 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 MXRA8Q9BRK3 442 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 C17orf80Q9BSJ5 609 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 ANO3Q9BYT9 981 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 IFIH1Q9BYX4 1025 aaKnown RBP17.43■□□□□ 0.38
LIMS3-203ENST00000480744 SMARCAD1Q9H4L7 1026 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 TUBE1Q9UJT0 475 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 COG5Q9UP83 839 aa17.43■□□□□ 0.38
LIMS3-203ENST00000480744 RALGAPA2Q2PPJ7 1873 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 SMCO2A6NFE2 343 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 CHRNA1P02708 482 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 GHRP10912 638 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 CPA1P15085 419 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 HTRA4P83105 476 aaPredicted RBP17.42■□□□□ 0.38
LIMS3-203ENST00000480744 FUT2Q10981 343 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 FAM26DQ5JW98 314 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 RSPH3Q86UC2 560 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 CYP2W1Q8TAV3 490 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 APBB2Q92870 758 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 HLA-CQ95604 372 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 KCNH7Q9NS40 1196 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 TMEM260Q9NX78 707 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 SLC9A2Q9UBY0 812 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 BRWD1Q9NSI6 2320 aa17.42■□□□□ 0.38
LIMS3-203ENST00000480744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.41■□□□□ 0.38
LIMS3-203ENST00000480744 hCG_1984214I3L0E3 225 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms