RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 CEP55Q53EZ4 464 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 CNKSR3Q6P9H4 555 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
CDK9-203ENST00000480353 MAFAQ8NHW3 353 aaPredicted RBP17.49■□□□□ 0.39
CDK9-203ENST00000480353 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
CDK9-203ENST00000480353 ZBED2Q9BTP6 218 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
CDK9-203ENST00000480353 RNPEPQ9H4A4 650 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 KCNH7Q9NS40 1196 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 PDRG1Q9NUG6 133 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 SETD4Q9NVD3 440 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 ERAP1Q9NZ08 941 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 NID2Q14112 1375 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 RSPH10B2B2RC85 870 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 TREHO43280 583 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 EFCAB14O75071 495 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 RSPH10BP0C881 870 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
CDK9-203ENST00000480353 SREBF1P36956 1147 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 IKBKEQ14164 716 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 PHOSPHO2Q8TCD6 241 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 AGXT2Q9BYV1 514 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 UPF3BQ9BZI7 483 aaKnown RBP17.48■□□□□ 0.39
CDK9-203ENST00000480353 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
CDK9-203ENST00000480353 NRCAMQ92823 1304 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 ESYT2A0FGR8 921 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 IFNAR1P17181 557 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 NLRP5P59047 1200 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 STK3Q13188 491 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 RSPH3Q86UC2 560 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 PLA2G4DQ86XP0 818 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 NCOA5Q9HCD5 579 aaKnown RBP17.47■□□□□ 0.39
CDK9-203ENST00000480353 MYO9BQ13459 2157 aa17.47■□□□□ 0.39
CDK9-203ENST00000480353 CAND2O75155 1236 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 LGR5O75473 907 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 CTSHP09668 335 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 IGFBP4P22692 258 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 CLK2P49760 499 aaKnown RBP17.46■□□□□ 0.39
CDK9-203ENST00000480353 TOB2Q14106 344 aaPredicted RBP17.46■□□□□ 0.39
CDK9-203ENST00000480353 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 ZNF274Q96GC6 653 aaPredicted RBP17.46■□□□□ 0.39
CDK9-203ENST00000480353 PRDM12Q9H4Q4 367 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
CDK9-203ENST00000480353 TRPC6Q9Y210 931 aa17.46■□□□□ 0.39
CDK9-203ENST00000480353 YBX2Q9Y2T7 364 aaKnown RBP17.46■□□□□ 0.39
CDK9-203ENST00000480353 NFASCO94856 1347 aa17.46■□□□□ 0.38
CDK9-203ENST00000480353 ABHD14A-ACY1A0A1B0GW23 586 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 GSTTP1A0A1W2PQM5 241 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
CDK9-203ENST00000480353 BACH1O14867 736 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 TLL1O43897 1013 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 NBNO60934 754 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 CXCL10P02778 98 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 ARP10275 920 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 MYOGP15173 224 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 IGBP1P78318 339 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 SETQ01105 290 aaPredicted RBP17.45■□□□□ 0.38
CDK9-203ENST00000480353 HIC1Q14526 733 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
CDK9-203ENST00000480353 HERC6Q8IVU3 1022 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 LMBR1Q8WVP7 490 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 WNT8BQ93098 351 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 VWCEQ96DN2 955 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 LARP6Q9BRS8 491 aaKnown RBP17.45■□□□□ 0.38
CDK9-203ENST00000480353 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 TELO2Q9Y4R8 837 aa17.45■□□□□ 0.38
CDK9-203ENST00000480353 CDKL5O76039 1030 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 CA3P07451 260 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 EVCP57679 992 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 ACTR2P61160 394 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 WDR5P61964 334 aaKnown RBP17.44■□□□□ 0.38
CDK9-203ENST00000480353 GRIK4Q16099 956 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 PKN1Q16512 942 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 FAM160B1Q5W0V3 765 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 TAF2Q6P1X5 1199 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 PPM1EQ8WY54 764 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 SEPT8Q92599 483 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 ZNF577Q9BSK1 485 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 SH3GLB2Q9NR46 395 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 TUBE1Q9UJT0 475 aa17.44■□□□□ 0.38
CDK9-203ENST00000480353 RRN3P2A6NIE6 340 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 MEIS1O00470 390 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 DEXIO95424 95 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 AMHP03971 560 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 HOXC8P31273 242 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 STAT5BP51692 787 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 NTRK3Q16288 839 aa17.43■□□□□ 0.38
CDK9-203ENST00000480353 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDK9-203ENST00000480353 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms