RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 BCAS3Q9H6U6 928 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 EHMT1Q9H9B1 1298 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 TCEAL9Q9UHQ7 104 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 MUTYHQ9UIF7 546 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 RBM8AQ9Y5S9 174 aaKnown RBP8.16□□□□□ -1.1
COL17A1-205ENST00000480127 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 MYH6P13533 1939 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PNMA6FA0A0J9YX94 578 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 H3BRB1 525 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 GRM6O15303 877 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 NCK2O43639 380 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PRC1O43663 620 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PPP1R11O60927 126 aaPredicted RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 CAND2O75155 1236 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 TBX10O75333 385 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 LGALS2P05162 132 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 RB1P06400 928 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 CYP21A2P08686 494 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 CTSHP09668 335 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 TGFB3P10600 412 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 GSPT1P15170 499 aaKnown RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PDE4AP27815 886 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 GTF2F1P35269 517 aaKnown RBP eCLIP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 BMPR1AP36894 532 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 ADAM17P78536 824 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PTH1RQ03431 593 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 GRM4Q14833 912 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PGM5Q15124 567 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 CLUL1Q15846 466 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 FAM26DQ5JW98 314 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 IER5LQ5T953 404 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 BMP8AQ7Z5Y6 402 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 RNF135Q8IUD6 432 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 ZNF654Q8IZM8 581 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 TMTC2Q8N394 836 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 CCDC82Q8N4S0 544 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 FIBCD1Q8N539 461 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 PRSS33Q8NF86 280 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 MTMR8Q96EF0 704 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 IL17RAQ96F46 866 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 ZFP91Q96JP5 570 aaPredicted RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 MYL10Q9BUA6 226 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 IFIH1Q9BYX4 1025 aaKnown RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 LMAN2LQ9H0V9 348 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 TUT1Q9H6E5 874 aaKnown RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 MAP3K20Q9NYL2 800 aaKnown RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 MAD2L2Q9UI95 211 aa8.15□□□□□ -1.1
COL17A1-205ENST00000480127 ZNF215Q9UL58 517 aaPredicted RBP8.15□□□□□ -1.1
COL17A1-205ENST00000480127 LAMA4Q16363 1823 aa8.15□□□□□ -1.11
COL17A1-205ENST00000480127 ZNF318Q5VUA4 2279 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 ATG2AQ2TAZ0 1938 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 SPDYE3A6NKU9 549 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 LINC01565O15544 149 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 SGSM2O43147 1006 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 DDAH1O94760 285 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 CALM1P0DP23 149 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 CALM2P0DP24 149 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 CALM3P0DP25 149 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 GNAT1P11488 350 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 CTNNB1P35222 781 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 SMAD4Q13485 552 aaKnown RBP8.14□□□□□ -1.11
COL17A1-205ENST00000480127 CAMK1Q14012 370 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 NEDD9Q14511 834 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 UTP14CQ5TAP6 766 aaKnown RBP8.14□□□□□ -1.11
COL17A1-205ENST00000480127 HEATR3Q7Z4Q2 680 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 MICU3Q86XE3 530 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 SAMD3Q8N6K7 520 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 EDAQ92838 391 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 APBB2Q92870 758 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
COL17A1-205ENST00000480127 ZNF689Q96CS4 500 aaPredicted RBP8.14□□□□□ -1.11
COL17A1-205ENST00000480127 POP1Q99575 1024 aaKnown RBP8.14□□□□□ -1.11
COL17A1-205ENST00000480127 C11orf84Q9BUA3 381 aaPredicted RBP8.14□□□□□ -1.11
COL17A1-205ENST00000480127 SETD4Q9NVD3 440 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 RTEL1Q9NZ71 1219 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 TELO2Q9Y4R8 837 aa8.14□□□□□ -1.11
COL17A1-205ENST00000480127 MYH7BA7E2Y1 1941 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 RALGAPA2Q2PPJ7 1873 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 NLRC5Q86WI3 1866 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 ADGRA3Q8IWK6 1321 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 BAZ2BQ9UIF8 2168 aaKnown RBP8.13□□□□□ -1.11
COL17A1-205ENST00000480127 PALM3A6NDB9 673 aaPredicted RBP8.13□□□□□ -1.11
COL17A1-205ENST00000480127 STXBP3O00186 592 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 CHRNA1P02708 482 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 MMP1P03956 469 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 NEFLP07196 543 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 SEMA3FQ13275 785 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 ADAM15Q13444 863 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 SEC23AQ15436 765 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 SLC35G1Q2M3R5 365 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 RAB11FIP4Q86YS3 637 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 TMEM87BQ96K49 555 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 MSLNLQ96KJ4 702 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 GPR20Q99678 358 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 USP26Q9BXU7 913 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 IGFLR1Q9H665 355 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms