RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MAPRE2Q15555 327 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 DNAL1Q4LDG9 190 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TRAPPC3LQ5T215 181 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CCNI2Q6ZMN8 369 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CRLF3Q8IUI8 442 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TEX9Q8N6V9 391 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TRIML2Q8N7C3 387 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 DHX38Q92620 1227 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PARVGQ9HBI0 331 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 BUB1O43683 1085 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 UFL1O94874 794 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 LIG4P49917 911 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MYL7Q01449 175 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TFDP1Q14186 410 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 RASA3Q14644 834 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 E2F5Q15329 346 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 PRR16Q569H4 304 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM83BQ5T0W9 1011 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 DCAF15Q66K64 600 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TRIM68Q6AZZ1 485 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 SETD3Q86TU7 594 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 FOXP4Q8IVH2 680 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MCPH1Q8NEM0 835 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 LZICQ8WZA0 190 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 STRBPQ96SI9 672 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 RIOK1Q9BRS2 568 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CACYBPQ9HB71 228 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 DDX25Q9UHL0 483 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 GSTA1P08263 222 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ALDH1B1P30837 517 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CRYMQ14894 314 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TBC1D1Q86TI0 1168 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ACRBPQ8NEB7 543 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 GEMIN8Q9NWZ8 242 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 UVRAGQ9P2Y5 699 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF608Q9ULD9 1512 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 USTQ9Y2C2 406 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ORC6Q9Y5N6 252 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 GYG2O15488 501 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TOM1O60784 492 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MYBL1P10243 752 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 AP3M2P53677 418 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MRPS9P82933 396 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ILF2Q12905 390 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MESDQ14696 234 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC30A9Q6PML9 568 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 RBM43Q6ZSC3 357 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC7A3Q8WY07 619 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 PGBD1Q96JS3 809 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MKNK1Q9BUB5 465 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ENC1O14682 589 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TJP3O95049 919 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 KLC1Q07866 573 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 SLFN13Q68D06 897 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ATP11CQ8NB49 1132 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 GJA10Q969M2 543 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CCDC138Q96M89 665 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 EPN3Q9H201 632 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 NFU1Q9UMS0 254 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ARHGAP26Q9UNA1 814 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CD2APQ9Y5K6 639 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 H2AFXP16104 143 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 ACADSP16219 412 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MDH1P40925 334 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TECP42680 631 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 MRPS25P82663 173 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CDK17Q00537 523 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CYP27A1Q02318 531 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 DMP1Q13316 513 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 CUL3Q13618 768 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 NAALADL2Q58DX5 795 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TBC1D9BQ66K14 1250 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 RSBN1LQ6PCB5 846 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 PARP9Q8IXQ6 854 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 SCG3Q8WXD2 468 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 TTC1Q99614 292 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 PDP2Q9P2J9 529 aa6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 APOBEC2Q9Y235 224 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-205ENST00000480058 BBOX1O75936 387 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 A1BGP04217 495 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 TMOD1P28289 359 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 ARL4AP40617 200 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 GPC5P78333 572 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CTDSPL2Q05D32 466 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 MYO1EQ12965 1108 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 E4F1Q66K89 784 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 DNAJC24Q6P3W2 148 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 TPH2Q8IWU9 490 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 MGARPQ8TDB4 240 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CARD9Q9H257 536 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 AS3MTQ9HBK9 375 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 TRIM33Q9UPN9 1127 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CFBP00751 764 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 FGGP02679 453 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CALB1P05937 261 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC1A1P43005 524 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms