RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 POTEGQ6S5H5 508 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 VSTM4Q8IW00 320 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 FAM114A1Q8IWE2 563 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 KIAA0895Q8NCT3 520 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 CCDC150Q8NCX0 1101 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 INPP4AQ96PE3 977 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-204ENST00000480057 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 SAMSN1Q9NSI8 373 aaKnown RBP12.27□□□□□ -0.45
VTI1A-204ENST00000480057 PANK4Q9NVE7 773 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 TCEAL9Q9UHQ7 104 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 B4DLN1 442 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 FGFR1OPO95684 399 aaKnown RBP12.26□□□□□ -0.45
VTI1A-204ENST00000480057 GAP43P17677 238 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 PTGS1P23219 599 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 CLCN1P35523 988 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 STX17P56962 302 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 LRRC63Q05C16 580 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 COASYQ13057 564 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 PLS1Q14651 629 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
VTI1A-204ENST00000480057 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 CENPPQ6IPU0 288 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 DYMQ7RTS9 669 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 MIER3Q7Z3K6 550 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 DYDC2Q96IM9 177 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 SPATC1LQ9H0A9 340 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-204ENST00000480057 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 NFASCO94856 1347 aa12.26□□□□□ -0.45
VTI1A-204ENST00000480057 SSBP05455 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 KRT18P05783 430 aaKnown RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 P4HBP07237 508 aaKnown RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 IDEP14735 1019 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 ICAM3P32942 547 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 ITGB3BPQ13352 177 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 NR1I3Q14994 352 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 GNPTABQ3T906 1256 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 ZNF746Q6NUN9 644 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 MOB2Q70IA6 237 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 APTXQ7Z2E3 356 aaKnown RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 TMC6Q7Z403 805 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 SHCBP1Q8NEM2 672 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 TRIM47Q96LD4 638 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 NAP1L5Q96NT1 182 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 MPHOSPH6Q99547 160 aaKnown RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 ZSWIM4Q9H7M6 989 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 BTBD7Q9P203 1132 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 ADD3Q9UEY8 706 aaKnown RBP12.25□□□□□ -0.45
VTI1A-204ENST00000480057 PCDHA2Q9Y5H9 948 aa12.25□□□□□ -0.45
VTI1A-204ENST00000480057 WDR64B1ANS9 1081 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 NRDCO43847 1150 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 DKC1O60832 514 aaKnown RBP eCLIP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 CNMDO75829 334 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 LCTP09848 1927 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 CETPP11597 493 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 FCER1AP12319 257 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 MYCLP12524 364 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 GUCY2CP25092 1073 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 PSMC6P62333 389 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 GIT2Q14161 759 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 TCP11X2Q5H9J9 407 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 ITIH6Q6UXX5 1313 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 LRRC8AQ8IWT6 810 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 SMAP1Q8IYB5 467 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 UIMC1Q96RL1 719 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 TSG101Q99816 390 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 DUSP9Q99956 384 aaKnown RBP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 TIPINQ9BVW5 301 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 MROH8Q9H579 483 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 OLFML3Q9NRN5 406 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 INTS13Q9NVM9 706 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 RGL1Q9NZL6 768 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 MAGEC2Q9UBF1 373 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 NRBP1Q9UHY1 535 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 DBR1Q9UK59 544 aaKnown RBP12.24□□□□□ -0.45
VTI1A-204ENST00000480057 ODF2LQ9ULJ1 636 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 COL4A3BPQ9Y5P4 624 aa12.24□□□□□ -0.45
VTI1A-204ENST00000480057 TESPA1A2RU30 521 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 SPATA31C2B4DYI2 1134 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 KCNJ18B7U540 433 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 CHMP2AO43633 222 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 TBCAO75347 108 aaKnown RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 EDNRBP24530 442 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 PBX1P40424 430 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms