RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 LMNB1P20700 586 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 CXCR5P32302 372 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ABL2P42684 1182 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 CCDC38Q502W7 563 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 RUFY4Q6ZNE9 571 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 SMCR8Q8TEV9 937 aaPredicted RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 EPAS1Q99814 870 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 FAM167BQ9BTA0 163 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 MOV10L1Q9BXT6 1211 aaKnown RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 SWAP70Q9UH65 585 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 A0A1W2PQC6 194 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 YDJCA8MPS7 323 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 CYP27A1Q02318 531 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 PODNQ7Z5L7 613 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHD6-208ENST00000480022 PSMB7Q99436 277 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 KCNQ5Q9NR82 932 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 CEP131Q9UPN4 1083 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
CHD6-208ENST00000480022 ZSCAN5CA6NGD5 496 aaPredicted RBP11.91□□□□□ -0.5
CHD6-208ENST00000480022 RASSF10A6NK89 507 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
CHD6-208ENST00000480022 KIF5BP33176 963 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 RANBP1P43487 201 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 PAK1Q13153 545 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 SPA17Q15506 151 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 RILPL1Q5EBL4 403 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 RRAGBQ5VZM2 374 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 ARHGAP22Q7Z5H3 698 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 LRWD1Q9UFC0 647 aa11.91□□□□□ -0.5
CHD6-208ENST00000480022 WDR19Q8NEZ3 1342 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 LRRD1A4D1F6 860 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD6-208ENST00000480022 IFI16Q16666 785 aaKnown RBP11.9□□□□□ -0.5
CHD6-208ENST00000480022 ANKRD20A2Q5SQ80 823 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 ANKRD20A1Q5TYW2 823 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 APLFQ8IW19 511 aaPredicted RBP11.9□□□□□ -0.5
CHD6-208ENST00000480022 SPATA5Q8NB90 893 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 CASKIN2Q8WXE0 1202 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 JDP2Q8WYK2 163 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 CHMP6Q96FZ7 201 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 RNF8O76064 485 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 MOCS3O95396 460 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 SETSIPP0DME0 302 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 CFAP221Q4G0U5 840 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 AGBL2Q5U5Z8 902 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 CCDC155Q8N6L0 562 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 FAM81AQ8TBF8 368 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 ANKRD27Q96NW4 1050 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 CNOT8Q9UFF9 292 aaKnown RBP11.9□□□□□ -0.5
CHD6-208ENST00000480022 ZNRF3Q9ULT6 936 aa11.9□□□□□ -0.5
CHD6-208ENST00000480022 BTBD18B2RXH4 712 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 RNF113AO15541 343 aaKnown RBP11.89□□□□□ -0.51
CHD6-208ENST00000480022 NQO1P15559 274 aaKnown RBP11.89□□□□□ -0.51
CHD6-208ENST00000480022 ZAP70P43403 619 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 MXRA7P84157 204 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
CHD6-208ENST00000480022 TEKT4Q8WW24 435 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 GORASP1Q9BQQ3 440 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 MLXIPQ9HAP2 919 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 MYH10P35580 1976 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 A0A087X0B3 334 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 DPPA5A6NC42 116 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 M0R2C6 588 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 EVI5O60447 810 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 PYGBP11216 843 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 RXRAP19793 462 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 CCNG1P51959 295 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 GTF2IP78347 998 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 ITIH4Q14624 930 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 SEPT2Q15019 361 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 TAF11Q15544 211 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 NELFBQ8WX92 580 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHD6-208ENST00000480022 RNF181Q9P0P0 153 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 RNF14Q9UBS8 474 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 ECM29Q5VYK3 1845 aa11.89□□□□□ -0.51
CHD6-208ENST00000480022 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 IMPDH2P12268 514 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 ATP2A2P16615 1042 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 HSD17B3P37058 310 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 MAGEA8P43361 318 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 ZNF844Q08AG5 666 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 HHATQ5VTY9 493 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 NAF1Q96HR8 494 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms