RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PRDM6Q9NQX0 595 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 PKD2L1Q9P0L9 805 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 THEGQ9P2T0 379 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 XIRP2A4UGR9 3374 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 MYO9BQ13459 2157 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 STXBP3O00186 592 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-218ENST00000479554 CTSHP09668 335 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 RCAN1P53805 252 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 ARHGAP4P98171 946 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 FUT2Q10981 343 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 TEX2Q8IWB9 1127 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 LMBR1Q8WVP7 490 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 SEPT1Q8WYJ6 367 aa16.4■□□□□ 0.22
ATG4B-218ENST00000479554 SYMPKQ92797 1274 aaKnown RBP16.4■□□□□ 0.22
ATG4B-218ENST00000479554 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
ATG4B-218ENST00000479554 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
ATG4B-218ENST00000479554 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-218ENST00000479554 LCHNA4D1U4 455 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 RFXAPO00287 272 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 MAFGO15525 162 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 GJB5O95377 273 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 CPA1P15085 419 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 CDC27P30260 824 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
ATG4B-218ENST00000479554 DBF4BQ8NFT6 615 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 ANO3Q9BYT9 981 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 GLT8D2Q9H1C3 349 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 NRCAMQ92823 1304 aa16.39■□□□□ 0.21
ATG4B-218ENST00000479554 COL4A4P53420 1690 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-218ENST00000479554 GSTTP1A0A1W2PQM5 241 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 SMCO2A6NFE2 343 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 EPOPA6NHQ4 379 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-218ENST00000479554 MARK3P27448 753 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 HSPA4P34932 840 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 ADAM17P78536 824 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 PPFIA1Q13136 1202 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 PLEKHG4Q58EX7 1191 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 Q6ZUG5 572 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 ATXN2LQ8WWM7 1075 aaKnown RBP16.38■□□□□ 0.21
ATG4B-218ENST00000479554 GLG1Q92896 1179 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 KCNB2Q92953 911 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 RAD9AQ99638 391 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 MXRA8Q9BRK3 442 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 TSPYL2Q9H2G4 693 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-218ENST00000479554 JPH1Q9HDC5 661 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-218ENST00000479554 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-218ENST00000479554 ERAP1Q9NZ08 941 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 SNX14Q9Y5W7 946 aa16.38■□□□□ 0.21
ATG4B-218ENST00000479554 MICAL3Q7RTP6 2002 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 AMHP03971 560 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 AP3B2Q13367 1082 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
ATG4B-218ENST00000479554 MYOCDQ8IZQ8 938 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 SEPT8Q92599 483 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 BRF1Q92994 677 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 SMARCAD1Q9H4L7 1026 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 KCNH7Q9NS40 1196 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 SLC9A2Q9UBY0 812 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 MTCH2Q9Y6C9 303 aa16.37■□□□□ 0.21
ATG4B-218ENST00000479554 REC8O95072 547 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 POU3F3P20264 500 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-218ENST00000479554 ADD1P35611 737 aaKnown RBP16.36■□□□□ 0.21
ATG4B-218ENST00000479554 SREBF1P36956 1147 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-218ENST00000479554 GRIK4Q16099 956 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 PFKFB3Q16875 520 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-218ENST00000479554 CEP55Q53EZ4 464 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 TAF2Q6P1X5 1199 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 SPRED2Q7Z698 418 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 SDF4Q9BRK5 362 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 TUBE1Q9UJT0 475 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 NID2Q14112 1375 aa16.36■□□□□ 0.21
ATG4B-218ENST00000479554 SCG2P13521 617 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 CLK2P49760 499 aaKnown RBP16.35■□□□□ 0.21
ATG4B-218ENST00000479554 MRPS5P82675 430 aaKnown RBP16.35■□□□□ 0.21
ATG4B-218ENST00000479554 GRB10Q13322 594 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 SKIV2LQ15477 1246 aaKnown RBP16.35■□□□□ 0.21
ATG4B-218ENST00000479554 FAM26DQ5JW98 314 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 RUFY4Q6ZNE9 571 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 RSPH3Q86UC2 560 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 CYP2W1Q8TAV3 490 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 AZI2Q9H6S1 392 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 INSL6Q9Y581 213 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 NFASCO94856 1347 aa16.35■□□□□ 0.21
ATG4B-218ENST00000479554 MUC3AQ02505 3323 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms