RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 RCAN1P53805 252 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
HMGCL-205ENST00000479458 TIGD5Q53EQ6 642 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 Q6ZUG5 572 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 TMTC3Q6ZXV5 915 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 SPRED2Q7Z698 418 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 MCF2L2Q86YR7 1114 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 RNF135Q8IUD6 432 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 FBXL16Q8N461 479 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 FANCBQ8NB91 859 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 DNERQ8NFT8 737 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 PIBF1Q8WXW3 757 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 RAD9AQ99638 391 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 TM6SF1Q9BZW5 370 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 COL20A1Q9P218 1284 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 MUTYHQ9UIF7 546 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 PCDHA1Q9Y5I3 950 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 COL4A6Q14031 1691 aa8.88□□□□□ -0.99
HMGCL-205ENST00000479458 ZFHX4Q86UP3 3567 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 CNTNAP5Q8WYK1 1306 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 NCOR2Q9Y618 2525 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 LCHNA4D1U4 455 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 GOLGA8AA7E2F4 631 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 GJB5O95377 273 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 PARNO95453 639 aaKnown RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 IQCF3P0C7M6 154 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 EDNRBP24530 442 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 HSD17B4P51659 736 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 FGD1P98174 961 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 APOBRQ0VD83 1088 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 FUT2Q10981 343 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 TRAF1Q13077 416 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 FSCN1Q16658 493 aaKnown RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 RTN1Q16799 776 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 PTPROQ16827 1216 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 NBPF20Q3BBV1 942 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 ASCL5Q7RTU5 278 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 FBXO16Q8IX29 292 aaPredicted RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 CMTR1Q8N1G2 835 aaKnown RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 ATOH1Q92858 354 aaPredicted RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 BRF1Q92994 677 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 RRP36Q96EU6 259 aaKnown RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 SAMD11Q96NU1 681 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 VTA1Q9NP79 307 aa8.87□□□□□ -0.99
HMGCL-205ENST00000479458 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 RBM28Q9NW13 759 aaKnown RBP8.87□□□□□ -0.99
HMGCL-205ENST00000479458 NID2Q14112 1375 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 EP300Q09472 2414 aaPredicted RBP8.86□□□□□ -0.99
HMGCL-205ENST00000479458 LINC01553A4QN01 128 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 H3BQ06 376 aaPredicted RBP8.86□□□□□ -0.99
HMGCL-205ENST00000479458 EIF5BO60841 1220 aaKnown RBP8.86□□□□□ -0.99
HMGCL-205ENST00000479458 EFCAB14O75071 495 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 KRT37O76014 449 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 CFBP00751 764 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 CDC27P30260 824 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 KCNJ6P48051 423 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 ANAPC15P60006 121 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 WDR5P61964 334 aaKnown RBP8.86□□□□□ -0.99
HMGCL-205ENST00000479458 TNFAIP2Q03169 654 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 CTC1Q2NKJ3 1217 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 C8orf34Q49A92 452 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 TAPT1Q6NXT6 567 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 EEPD1Q7L9B9 569 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 DEFB128Q7Z7B8 93 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 TLK2Q86UE8 772 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 SAMD3Q8N6K7 520 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 IL17RAQ96F46 866 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 TAAR1Q96RJ0 339 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 PDGFCQ9NRA1 345 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 MAP3K20Q9NYL2 800 aaKnown RBP8.86□□□□□ -0.99
HMGCL-205ENST00000479458 SEC63Q9UGP8 760 aaKnown RBP8.86□□□□□ -0.99
HMGCL-205ENST00000479458 CYP46A1Q9Y6A2 500 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 DMXL1Q9Y485 3027 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 MICAL3Q7RTP6 2002 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 CFAP47Q6ZTR5 3102 aa8.86□□□□□ -0.99
HMGCL-205ENST00000479458 ZNF292O60281 2723 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 hCG_1642624A0A1W2PR95 340 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 GCOM1H8Y6P7 765 aaPredicted RBP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 POLR2MP0CAP2 368 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 AVPR2P30518 371 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 HOXA13P31271 388 aaPredicted RBP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 METAP2P50579 478 aaKnown RBP eCLIP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 EVCP57679 992 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 ZXDAP98168 799 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 BEX3Q00994 111 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 PTPN11Q06124 597 aaPredicted RBP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 PDE4DQ08499 809 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 SIGLEC14Q08ET2 396 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 BFSP2Q13515 415 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 TOB2Q14106 344 aaPredicted RBP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 CBX2Q14781 532 aaPredicted RBP8.85□□□□□ -0.99
HMGCL-205ENST00000479458 PPP2R5BQ15173 497 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 CCDC82Q8N4S0 544 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 BANK1Q8NDB2 785 aa8.85□□□□□ -0.99
HMGCL-205ENST00000479458 NSUN6Q8TEA1 469 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms