RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 RNPC3Q96LT9 517 aaKnown RBP23.57■■□□□ 1.36
PKP4-209ENST00000479398 RNPEPQ9H4A4 650 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 ZNF215Q9UL58 517 aaPredicted RBP23.57■■□□□ 1.36
PKP4-209ENST00000479398 KCNJ14Q9UNX9 436 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 LIMCH1Q9UPQ0 1083 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 KAT6AQ92794 2004 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 FGBP02675 491 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 SMIM10L2AP0DMW4 78 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 SMIM10L2BP0DMW5 78 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 FDPSP14324 419 aaKnown RBP23.56■■□□□ 1.36
PKP4-209ENST00000479398 XBP1P17861 261 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 PTK7Q13308 1070 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 GPR153Q6NV75 609 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 CCDC155Q8N6L0 562 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 CAGE1Q8TC20 777 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 WASF1Q92558 559 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 PHF20Q9BVI0 1012 aa23.56■■□□□ 1.36
PKP4-209ENST00000479398 C17orf102A2RUQ5 167 aa23.55■■□□□ 1.36
PKP4-209ENST00000479398 HOXC8P31273 242 aa23.55■■□□□ 1.36
PKP4-209ENST00000479398 PSRC1Q6PGN9 363 aaPredicted RBP23.55■■□□□ 1.36
PKP4-209ENST00000479398 DHX38Q92620 1227 aaKnown RBP23.55■■□□□ 1.36
PKP4-209ENST00000479398 VWCEQ96DN2 955 aa23.55■■□□□ 1.36
PKP4-209ENST00000479398 SMARCAD1Q9H4L7 1026 aa23.55■■□□□ 1.36
PKP4-209ENST00000479398 IPO5O00410 1097 aaKnown RBP23.54■■□□□ 1.36
PKP4-209ENST00000479398 DHX15O43143 795 aaKnown RBP23.54■■□□□ 1.36
PKP4-209ENST00000479398 LGR5O75473 907 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 ATG7O95352 703 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 GNAT1P11488 350 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 ACTR2P61160 394 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 SETQ01105 290 aaPredicted RBP23.54■■□□□ 1.36
PKP4-209ENST00000479398 RBL2Q08999 1139 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 PRR16Q569H4 304 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 NSUN7Q8NE18 718 aaKnown RBP23.54■■□□□ 1.36
PKP4-209ENST00000479398 TBCKQ8TEA7 893 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 AFAP1L1Q8TED9 768 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 GLG1Q92896 1179 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 ATP6V0A1Q93050 837 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 ZNF577Q9BSK1 485 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 GJB4Q9NTQ9 266 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 SETD4Q9NVD3 440 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 ERAP1Q9NZ08 941 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 LAMA3Q16787 3333 aa23.54■■□□□ 1.36
PKP4-209ENST00000479398 RFC2P35250 354 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 RASIP1Q5U651 963 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 SERINC5Q86VE9 423 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 HERVK_113Q902F9 699 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 UIMC1Q96RL1 719 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 PCYT2Q99447 389 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 TBC1D22BQ9NU19 505 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 SCN5AQ14524 2016 aa23.53■■□□□ 1.36
PKP4-209ENST00000479398 DDX39AO00148 427 aaKnown RBP23.52■■□□□ 1.36
PKP4-209ENST00000479398 TREHO43280 583 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 PFKMP08237 780 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 CKBP12277 381 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 SELPP16109 830 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 TRIM71Q2Q1W2 868 aaKnown RBP23.52■■□□□ 1.36
PKP4-209ENST00000479398 DEFB128Q7Z7B8 93 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 LENG9Q96B70 501 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 ZSCAN31Q96LW9 406 aaPredicted RBP23.52■■□□□ 1.36
PKP4-209ENST00000479398 AZI2Q9H6S1 392 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 UPF2Q9HAU5 1272 aaKnown RBP23.52■■□□□ 1.36
PKP4-209ENST00000479398 EMSYQ7Z589 1322 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 NRCAMQ92823 1304 aa23.52■■□□□ 1.36
PKP4-209ENST00000479398 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.51■■□□□ 1.35
PKP4-209ENST00000479398 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.51■■□□□ 1.35
PKP4-209ENST00000479398 CCNE2O96020 404 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 STAT5BP51692 787 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 ADAM17P78536 824 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 SMAD3P84022 425 aaKnown RBP23.51■■□□□ 1.35
PKP4-209ENST00000479398 ST3GAL1Q11201 340 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 NONOQ15233 471 aaKnown RBP eCLIP23.51■■□□□ 1.351e-6■■■■■ 28.1
PKP4-209ENST00000479398 OTOP2Q7RTS6 562 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 PLPPR4Q7Z2D5 763 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 KRT25Q7Z3Z0 450 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 WNT8BQ93098 351 aa23.51■■□□□ 1.35
PKP4-209ENST00000479398 CYP3A7-CYP3A51PA0A087WV96 503 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 IGKV6D-21A0A0A0MT36 114 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 JAK2O60674 1132 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 PARNO95453 639 aaKnown RBP23.5■■□□□ 1.35
PKP4-209ENST00000479398 CYP3A7P24462 503 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 MARK3P27448 753 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 ABHD15Q6UXT9 468 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 LRRC8DQ7L1W4 858 aa23.5■■□□□ 1.35
PKP4-209ENST00000479398 GPNMBQ14956 572 aa23.49■■□□□ 1.35
PKP4-209ENST00000479398 Q4G0T1 1027 aa23.49■■□□□ 1.35
PKP4-209ENST00000479398 ZNF618Q5T7W0 954 aa23.49■■□□□ 1.35
PKP4-209ENST00000479398 LMBR1Q8WVP7 490 aa23.49■■□□□ 1.35
PKP4-209ENST00000479398 MTIF3Q9H2K0 278 aaKnown RBP23.49■■□□□ 1.35
PKP4-209ENST00000479398 CCDC194A0A1B0GVG4 234 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 MSH4O15457 936 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 THPOP40225 353 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 RABEP1Q15276 862 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 INF2Q27J81 1249 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 ZNF746Q6NUN9 644 aaPredicted RBP23.48■■□□□ 1.35
PKP4-209ENST00000479398 TRAF7Q6Q0C0 670 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 MOXD1Q6UVY6 613 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 CCDC83Q8IWF9 413 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 OXER1Q8TDS5 423 aa23.48■■□□□ 1.35
PKP4-209ENST00000479398 TNPO1Q92973 898 aaKnown RBP23.48■■□□□ 1.35
PKP4-209ENST00000479398 FTOQ9C0B1 505 aaKnown RBP eCLIP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms