RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 SMAP1Q8IYB5 467 aaPredicted RBP28.27■■■□□ 2.12
PERM1-203ENST00000479361 SLFN12Q8IYM2 578 aa28.27■■■□□ 2.12
PERM1-203ENST00000479361 SLC43A3Q8NBI5 491 aa28.27■■■□□ 2.12
PERM1-203ENST00000479361 KAT2BQ92831 832 aa28.27■■■□□ 2.12
PERM1-203ENST00000479361 ATP11BQ9Y2G3 1177 aa28.27■■■□□ 2.12
PERM1-203ENST00000479361 TELO2Q9Y4R8 837 aa28.27■■■□□ 2.12
PERM1-203ENST00000479361 DNAH12Q6ZR08 3092 aa28.27■■■□□ 2.12
PERM1-203ENST00000479361 GRIN2DO15399 1336 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 H3BRB1 525 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 CCNE2O96020 404 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 PSEN2P49810 448 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 CDK7P50613 346 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 CHMP4BP1P59074 171 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 MFSD10Q14728 455 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 NBPF20Q3BBV1 942 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 TRIM60Q495X7 471 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 TTC38Q5R3I4 469 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 UTP14CQ5TAP6 766 aaKnown RBP28.26■■■□□ 2.11
PERM1-203ENST00000479361 ANKRD33Q7Z3H0 272 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 TUT1Q9H6E5 874 aaKnown RBP28.26■■■□□ 2.11
PERM1-203ENST00000479361 AZI2Q9H6S1 392 aa28.26■■■□□ 2.11
PERM1-203ENST00000479361 PSMD10O75832 226 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 ATG7O95352 703 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 MCM7P33993 719 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 CALCRLQ16602 461 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 KIAA0753Q2KHM9 967 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 RILPL1Q5EBL4 403 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 MIS18BP1Q6P0N0 1132 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 BRAPQ7Z569 592 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 GLG1Q92896 1179 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 TOX2Q96NM4 488 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 SMARCAD1Q9H4L7 1026 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 NR2E3Q9Y5X4 410 aa28.25■■■□□ 2.11
PERM1-203ENST00000479361 EMSYQ7Z589 1322 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 DCDC2CA8MYV0 355 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 WDR64B1ANS9 1081 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 HAS3O00219 553 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 PQBP1O60828 265 aaKnown RBP28.24■■■□□ 2.11
PERM1-203ENST00000479361 SFNP31947 248 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 PTPN11Q06124 597 aaPredicted RBP28.24■■■□□ 2.11
PERM1-203ENST00000479361 ERAP1Q9NZ08 941 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 SAMM50Q9Y512 469 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 SCN10AQ9Y5Y9 1956 aa28.24■■■□□ 2.11
PERM1-203ENST00000479361 WNT7AO00755 349 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 TLR3O15455 904 aaKnown RBP28.23■■■□□ 2.11
PERM1-203ENST00000479361 STX6O43752 255 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 LGR5O75473 907 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 SUPT20HL2P0C7V6 817 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 JAK3P52333 1124 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 TLE2Q04725 743 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 FAM47CQ5HY64 1035 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 ABHD15Q6UXT9 468 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 TRIM50Q86XT4 487 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 C7orf61Q8IZ16 206 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 C7orf31Q8N865 590 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 RDM1Q8NG50 284 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 HAS1Q92839 578 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 GJA10Q969M2 543 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 PCDHA10Q9Y5I2 948 aa28.23■■■□□ 2.11
PERM1-203ENST00000479361 BACH1O14867 736 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 PSAPP07602 524 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 ZNF174Q15697 407 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 FAM160B1Q5W0V3 765 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 SESTD1Q86VW0 696 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 SPRYD3Q8NCJ5 442 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 UNC45AQ9H3U1 944 aa28.22■■■□□ 2.11
PERM1-203ENST00000479361 CHMP2AO43633 222 aa28.21■■■□□ 2.11
PERM1-203ENST00000479361 SLC26A2P50443 739 aa28.21■■■□□ 2.11
PERM1-203ENST00000479361 TOB1P50616 345 aaPredicted RBP28.21■■■□□ 2.11
PERM1-203ENST00000479361 PLPPR4Q7Z2D5 763 aa28.21■■■□□ 2.11
PERM1-203ENST00000479361 DISC1Q9NRI5 854 aa28.21■■■□□ 2.11
PERM1-203ENST00000479361 IGKV6D-21A0A0A0MT36 114 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 STAT5BP51692 787 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 PPP2R5CQ13362 524 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 FAM126BQ8IXS8 530 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 TNPO1Q92973 898 aaKnown RBP28.2■■■□□ 2.1
PERM1-203ENST00000479361 MTMR9Q96QG7 549 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 PCDHA12Q9UN75 941 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 MTMR6Q9Y217 621 aa28.2■■■□□ 2.1
PERM1-203ENST00000479361 SWSAP1Q6NVH7 229 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 B3GNT9Q6UX72 402 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 MIER3Q7Z3K6 550 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 FERMT3Q86UX7 667 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 AFAP1L1Q8TED9 768 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 PCYT2Q99447 389 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 ZNF302Q9NR11 478 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 PRKAG2Q9UGJ0 569 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 VAV3Q9UKW4 847 aa28.19■■■□□ 2.1
PERM1-203ENST00000479361 CLTBP09497 229 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 NBR1Q14596 966 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 PDXDC2PQ6P474 469 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 CCDC60Q8IWA6 550 aaPredicted RBP28.18■■■□□ 2.1
PERM1-203ENST00000479361 ZSCAN16Q9H4T2 348 aaPredicted RBP28.18■■■□□ 2.1
PERM1-203ENST00000479361 HDAC6Q9UBN7 1215 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 GTF2IRD1Q9UHL9 959 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 PCDHB6Q9Y5E3 794 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 ALPK3Q96L96 1907 aa28.18■■■□□ 2.1
PERM1-203ENST00000479361 TNRC18O15417 2968 aaPredicted RBP28.17■■■□□ 2.1
PERM1-203ENST00000479361 B4GALT4O60513 344 aa28.17■■■□□ 2.1
PERM1-203ENST00000479361 CD4P01730 458 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms