RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ZKSCAN5Q9Y2L8 839 aa6.88□□□□□ -1.31
RFC4-212ENST00000479307 YBX2Q9Y2T7 364 aaKnown RBP6.88□□□□□ -1.31
RFC4-212ENST00000479307 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
RFC4-212ENST00000479307 NEO1Q92859 1461 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 TTBK1Q5TCY1 1321 aaPredicted RBP6.87□□□□□ -1.31
RFC4-212ENST00000479307 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 TRAF5O00463 557 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 ZEB2O60315 1214 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 EFEMP2O95967 443 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 CYBBP04839 570 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 PDE6AP16499 860 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 OCRLQ01968 901 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 DSG1Q02413 1049 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 NR1I3Q14994 352 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 CBLL1Q75N03 491 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 CISD2Q8N5K1 135 aaKnown RBP6.87□□□□□ -1.31
RFC4-212ENST00000479307 UHMK1Q8TAS1 419 aaKnown RBP6.87□□□□□ -1.31
RFC4-212ENST00000479307 PHOSPHO1Q8TCT1 267 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 USP7Q93009 1102 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 KIRREL1Q96J84 757 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 TTC1Q99614 292 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 BOCQ9BWV1 1114 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 IFT22Q9H7X7 185 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
RFC4-212ENST00000479307 ZNF652Q9Y2D9 606 aa6.87□□□□□ -1.31
RFC4-212ENST00000479307 POGZQ7Z3K3 1410 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 ARID4BQ4LE39 1312 aaPredicted RBP6.86□□□□□ -1.31
RFC4-212ENST00000479307 BIN1O00499 593 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 HGSO14964 777 aaPredicted RBP6.86□□□□□ -1.31
RFC4-212ENST00000479307 EYA4O95677 639 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 DBHP09172 617 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 PMLP29590 882 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 STRN3Q13033 797 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 HHIPL2Q6UWX4 724 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
RFC4-212ENST00000479307 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
RFC4-212ENST00000479307 NLGN4XQ8N0W4 816 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 PIP4K2CQ8TBX8 421 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 PEX11GQ96HA9 241 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 RNF32Q9H0A6 362 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 SLC6A17Q9H1V8 727 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 DSEQ9UL01 958 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 APOBEC2Q9Y235 224 aaKnown RBP6.86□□□□□ -1.31
RFC4-212ENST00000479307 ZMYM4Q5VZL5 1548 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 UGGT2Q9NYU1 1516 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 ARHGEF12Q9NZN5 1544 aa6.86□□□□□ -1.31
RFC4-212ENST00000479307 SLC12A8A0AV02 714 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 ALG1L2C9J202 215 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 ZBTB7AO95365 584 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 MPOP05164 745 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 BPIP17213 487 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 CDK11BP21127 795 aaKnown RBP6.85□□□□□ -1.31
RFC4-212ENST00000479307 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 FIGNQ5HY92 759 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 ARHGAP36Q6ZRI8 547 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 EP400NLQ6ZTU2 488 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 STRA8Q7Z7C7 330 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 OSTM1Q86WC4 334 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
RFC4-212ENST00000479307 ATL2Q8NHH9 583 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 FAM126AQ9BYI3 521 aaPredicted RBP6.85□□□□□ -1.31
RFC4-212ENST00000479307 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 SMOC1Q9H4F8 434 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 SMURF1Q9HCE7 757 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 SRPK3Q9UPE1 567 aa6.85□□□□□ -1.31
RFC4-212ENST00000479307 ABCA8O94911 1581 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 PTPDC1A2A3K4 754 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 ZNF891A8MT65 544 aaPredicted RBP6.84□□□□□ -1.31
RFC4-212ENST00000479307 NKRFO15226 690 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFC4-212ENST00000479307 TADA3O75528 432 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 AMY2AP04746 511 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 COL6A2P12110 1019 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 AMY2BP19961 511 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 JAM2P57087 298 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 SLC9A5Q14940 896 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 RNF219Q5W0B1 726 aaPredicted RBP6.84□□□□□ -1.31
RFC4-212ENST00000479307 IRF2BP1Q8IU81 584 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 TRIM48Q8IWZ4 208 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 SMC1BQ8NDV3 1235 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 INTS4Q96HW7 963 aaKnown RBP6.84□□□□□ -1.31
RFC4-212ENST00000479307 SCYL1Q96KG9 808 aa6.84□□□□□ -1.31
RFC4-212ENST00000479307 PDGFDQ9GZP0 370 aaPredicted RBP6.84□□□□□ -1.31
RFC4-212ENST00000479307 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
RFC4-212ENST00000479307 UHRF1BP1Q6BDS2 1440 aa6.84□□□□□ -1.32
RFC4-212ENST00000479307 SETD1BQ9UPS6 1966 aaKnown RBP6.83□□□□□ -1.32
RFC4-212ENST00000479307 TCRBV5S4A2TA0A5A2 114 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 ABLIM1O14639 778 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 CLASP2O75122 1294 aaKnown RBP6.83□□□□□ -1.32
RFC4-212ENST00000479307 HIP1RO75146 1068 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 KRT15P19012 456 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 LSSP48449 732 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 CDKN1CP49918 316 aaPredicted RBP6.83□□□□□ -1.32
RFC4-212ENST00000479307 EPHA5P54756 1037 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 IL2P60568 153 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 OLFML2BQ68BL8 750 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms