RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 ADCY7P51828 1080 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 TAP1Q03518 808 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 TYW1BQ6NUM6 668 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 RPAINQ86UA6 219 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 TRIM50Q86XT4 487 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 MXRA8Q9BRK3 442 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 AGXT2Q9BYV1 514 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 SETD4Q9NVD3 440 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 ERAP1Q9NZ08 941 aa22.71■■□□□ 1.23
HPS4-211ENST00000479064 PRRC2BQ5JSZ5 2229 aaKnown RBP22.7■■□□□ 1.23
HPS4-211ENST00000479064 GSTTP1A0A1W2PQM5 241 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 GJB5O95377 273 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 CDC27P30260 824 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 METAP2P50579 478 aaKnown RBP eCLIP22.7■■□□□ 1.22
HPS4-211ENST00000479064 MKRN4PQ13434 485 aaPredicted RBP22.7■■□□□ 1.22
HPS4-211ENST00000479064 PLEKHG4Q58EX7 1191 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 UTP14CQ5TAP6 766 aaKnown RBP22.7■■□□□ 1.22
HPS4-211ENST00000479064 TAF2Q6P1X5 1199 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 BLOC1S2Q6QNY1 142 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 SMARCAD1Q9H4L7 1026 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 SNX14Q9Y5W7 946 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 NFASCO94856 1347 aa22.7■■□□□ 1.22
HPS4-211ENST00000479064 TRANK1O15050 2925 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 ESYT2A0FGR8 921 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 SMCO2A6NFE2 343 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 RPLP2P05387 115 aaKnown RBP22.69■■□□□ 1.22
HPS4-211ENST00000479064 PSMA5P28066 241 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 CLK2P49760 499 aaKnown RBP22.69■■□□□ 1.22
HPS4-211ENST00000479064 DEFB103AP81534 67 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 SP4Q02446 784 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 PFKFB3Q16875 520 aaPredicted RBP22.69■■□□□ 1.22
HPS4-211ENST00000479064 FAM26DQ5JW98 314 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 MCTP2Q6DN12 878 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 LMBR1Q8WVP7 490 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 ATXN2LQ8WWM7 1075 aaKnown RBP22.69■■□□□ 1.22
HPS4-211ENST00000479064 JAKMIP1Q96N16 626 aaKnown RBP22.69■■□□□ 1.22
HPS4-211ENST00000479064 RAD9AQ99638 391 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 ANO3Q9BYT9 981 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 JPH1Q9HDC5 661 aaPredicted RBP22.69■■□□□ 1.22
HPS4-211ENST00000479064 KCNH7Q9NS40 1196 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 TELO2Q9Y4R8 837 aa22.69■■□□□ 1.22
HPS4-211ENST00000479064 GTPBP6O43824 516 aaPredicted RBP22.68■■□□□ 1.22
HPS4-211ENST00000479064 SREBF1P36956 1147 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 ARHGAP4P98171 946 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 TCTN1Q2MV58 587 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 CEP55Q53EZ4 464 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 TJAP1Q5JTD0 557 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 Q6ZUG5 572 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 NIPA1Q7RTP0 329 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 DBF4BQ8NFT6 615 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 CCDC12Q8WUD4 166 aaPredicted RBP22.68■■□□□ 1.22
HPS4-211ENST00000479064 TNPO1Q92973 898 aaKnown RBP22.68■■□□□ 1.22
HPS4-211ENST00000479064 ZBED2Q9BTP6 218 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 NCOR1O75376 2440 aa22.68■■□□□ 1.22
HPS4-211ENST00000479064 SCG2P13521 617 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 RPS6KB1P23443 525 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 ADD1P35611 737 aaKnown RBP22.67■■□□□ 1.22
HPS4-211ENST00000479064 SEPT8Q92599 483 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 APBB2Q92870 758 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 BRF1Q92994 677 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 TSPYL2Q9H2G4 693 aaPredicted RBP22.67■■□□□ 1.22
HPS4-211ENST00000479064 THEGQ9P2T0 379 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 SLC9A2Q9UBY0 812 aa22.67■■□□□ 1.22
HPS4-211ENST00000479064 MBLAC1A4D2B0 266 aaPredicted RBP22.66■■□□□ 1.22
HPS4-211ENST00000479064 MEIS1O00470 390 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 AMHP03971 560 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 EVCP57679 992 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 APOBRQ0VD83 1088 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 PPFIA1Q13136 1202 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 GLG1Q92896 1179 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 SDF4Q9BRK5 362 aa22.66■■□□□ 1.22
HPS4-211ENST00000479064 RRN3P2A6NIE6 340 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 PRPF3O43395 683 aaKnown RBP22.65■■□□□ 1.22
HPS4-211ENST00000479064 RSPH3Q86UC2 560 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 PPM1EQ8WY54 764 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 ZMYND12Q9H0C1 365 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 AZI2Q9H6S1 392 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 LMCD1Q9NZU5 365 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 NAP1L2Q9ULW6 460 aaPredicted RBP22.65■■□□□ 1.22
HPS4-211ENST00000479064 INSL6Q9Y581 213 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 MTCH2Q9Y6C9 303 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 SIP14410 1827 aa22.65■■□□□ 1.22
HPS4-211ENST00000479064 VCANP13611 3396 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 ARHGEF15O94989 841 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 CYP3A4P08684 503 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 CPA1P15085 419 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 GRIK4Q16099 956 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 PLPPR4Q7Z2D5 763 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 CYP2W1Q8TAV3 490 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 CRYGNQ8WXF5 182 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 ARNTL2Q8WYA1 636 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 AGO4Q9HCK5 861 aaKnown RBP22.64■■□□□ 1.21
HPS4-211ENST00000479064 PKD2L1Q9P0L9 805 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 TUBE1Q9UJT0 475 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 COL4A6Q14031 1691 aa22.64■■□□□ 1.21
HPS4-211ENST00000479064 ATG7O95352 703 aa22.63■■□□□ 1.21
HPS4-211ENST00000479064 CTSHP09668 335 aa22.63■■□□□ 1.21
HPS4-211ENST00000479064 GNA11P29992 359 aa22.63■■□□□ 1.21
HPS4-211ENST00000479064 SLC26A2P50443 739 aa22.63■■□□□ 1.21
HPS4-211ENST00000479064 ERVK-21P61565 698 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms