RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 TMEM265A0A087WTH1 108 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 ACRP10323 421 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 CIITAP33076 1130 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 ZNF697Q5TEC3 545 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 FAM160B1Q5W0V3 765 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 LRRC8DQ7L1W4 858 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 C16orf59Q7L2K0 433 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 SCLYQ96I15 445 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 PKD2L1Q9P0L9 805 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 EMSYQ7Z589 1322 aa17.14■□□□□ 0.33
SNX21-210ENST00000478230 GSTTP1A0A1W2PQM5 241 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 RRN3P2A6NIE6 340 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 IPO5O00410 1097 aaKnown RBP17.13■□□□□ 0.33
SNX21-210ENST00000478230 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 ARP10275 920 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 PLPPR4Q7Z2D5 763 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 CRYGNQ8WXF5 182 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
SNX21-210ENST00000478230 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
SNX21-210ENST00000478230 ZNF577Q9BSK1 485 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 RNPEPQ9H4A4 650 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
SNX21-210ENST00000478230 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
SNX21-210ENST00000478230 EFCAB14O75071 495 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 LGR5O75473 907 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 SEC24BO95487 1268 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 CKBP12277 381 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 HOXC8P31273 242 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 STAT5BP51692 787 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 ACTR2P61160 394 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 KRT76Q01546 638 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX21-210ENST00000478230 RAB30Q15771 203 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 PRR16Q569H4 304 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 TAF2Q6P1X5 1199 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 OTOP2Q7RTS6 562 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 PPP1R13LQ8WUF5 828 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 MSRAQ9UJ68 235 aa17.12■□□□□ 0.33
SNX21-210ENST00000478230 IGLV3-22A0A075B6J6 115 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 CCDC194A0A1B0GVG4 234 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 ZBBXA8MT70 800 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 BAIAP3O94812 1187 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 ATG7O95352 703 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 TRIM29Q14134 588 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
SNX21-210ENST00000478230 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 SMAP1Q8IYB5 467 aaPredicted RBP17.11■□□□□ 0.33
SNX21-210ENST00000478230 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 SETD4Q9NVD3 440 aa17.11■□□□□ 0.33
SNX21-210ENST00000478230 RSPH10B2B2RC85 870 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 BACH1O14867 736 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 RSPH10BP0C881 870 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 THPOP40225 353 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 ME3Q16798 604 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 TRIM50Q86XT4 487 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 RASGRP4Q8TDF6 673 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 TBCKQ8TEA7 893 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 DHX38Q92620 1227 aaKnown RBP17.1■□□□□ 0.33
SNX21-210ENST00000478230 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 RIT2Q99578 217 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
SNX21-210ENST00000478230 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
SNX21-210ENST00000478230 KIF28PB7ZC32 967 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 TREHO43280 583 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 PSAPP07602 524 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
SNX21-210ENST00000478230 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
SNX21-210ENST00000478230 ZNF200P98182 395 aaPredicted RBP17.09■□□□□ 0.33
SNX21-210ENST00000478230 ITGB3BPQ13352 177 aaPredicted RBP17.09■□□□□ 0.33
SNX21-210ENST00000478230 ZNF618Q5T7W0 954 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 CNKSR3Q6P9H4 555 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 LMBR1Q8WVP7 490 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
SNX21-210ENST00000478230 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
SNX21-210ENST00000478230 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.32
SNX21-210ENST00000478230 POTEB3A0JP26 581 aa17.08■□□□□ 0.32
SNX21-210ENST00000478230 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
SNX21-210ENST00000478230 HBP1O60381 514 aa17.08■□□□□ 0.32
SNX21-210ENST00000478230 CXCL10P02778 98 aa17.08■□□□□ 0.32
SNX21-210ENST00000478230 CYP3A7P24462 503 aa17.08■□□□□ 0.32
SNX21-210ENST00000478230 MARK3P27448 753 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms