RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 HOXC8P31273 242 aa16.43■□□□□ 0.22
RC3H2-208ENST00000478216 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
RC3H2-208ENST00000478216 HERC4Q5GLZ8 1057 aaPredicted RBP16.43■□□□□ 0.22
RC3H2-208ENST00000478216 SUGP1Q8IWZ8 645 aaKnown RBP16.43■□□□□ 0.22
RC3H2-208ENST00000478216 PIBF1Q8WXW3 757 aa16.43■□□□□ 0.22
RC3H2-208ENST00000478216 PIGSQ96S52 555 aa16.43■□□□□ 0.22
RC3H2-208ENST00000478216 GPR20Q99678 358 aa16.43■□□□□ 0.22
RC3H2-208ENST00000478216 BCAS3Q9H6U6 928 aa16.43■□□□□ 0.22
RC3H2-208ENST00000478216 ALG13Q9NP73 1137 aaKnown RBP16.43■□□□□ 0.22
RC3H2-208ENST00000478216 LINC01565O15544 149 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 STAM2O75886 525 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 MMP1P03956 469 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 FAM26DQ5JW98 314 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 PBXIP1Q96AQ6 731 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
RC3H2-208ENST00000478216 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
RC3H2-208ENST00000478216 ERICH2A1L162 156 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
RC3H2-208ENST00000478216 PTPN5P54829 565 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 TRDNQ13061 729 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 PPFIA1Q13136 1202 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 TAF2Q6P1X5 1199 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 SMARCC2Q8TAQ2 1214 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 EDAQ92838 391 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 CUL5Q93034 780 aa16.41■□□□□ 0.22
RC3H2-208ENST00000478216 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 HIP1O00291 1037 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 CHRNA1P02708 482 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 MARK3P27448 753 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 LPIN1Q14693 890 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
RC3H2-208ENST00000478216 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 MTMR8Q96EF0 704 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
RC3H2-208ENST00000478216 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
RC3H2-208ENST00000478216 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 PALM3A6NDB9 673 aaPredicted RBP16.39■□□□□ 0.21
RC3H2-208ENST00000478216 TMEM221A6NGB7 291 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 M0R296 226 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 ICAM3P32942 547 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 TCF7P36402 384 aaPredicted RBP16.39■□□□□ 0.21
RC3H2-208ENST00000478216 IGBP1P78318 339 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
RC3H2-208ENST00000478216 HDAC1Q13547 482 aaPredicted RBP16.39■□□□□ 0.21
RC3H2-208ENST00000478216 RBM23Q86U06 439 aaKnown RBP16.39■□□□□ 0.21
RC3H2-208ENST00000478216 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 GLG1Q92896 1179 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 CLP1Q92989 425 aaKnown RBP16.39■□□□□ 0.21
RC3H2-208ENST00000478216 PHOX2BQ99453 314 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 CDY2AQ9Y6F7 541 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 DOCK5Q9H7D0 1870 aa16.39■□□□□ 0.21
RC3H2-208ENST00000478216 M0QZ92 97 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 ENPP3O14638 875 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 NRIP1P48552 1158 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 GRM4Q14833 912 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 GRIK4Q16099 956 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 GIMAP8Q8ND71 665 aaPredicted RBP16.38■□□□□ 0.21
RC3H2-208ENST00000478216 PRSS33Q8NF86 280 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 DNAJB3Q8WWF6 145 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 SNX27Q96L92 541 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 PRRX2Q99811 253 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
RC3H2-208ENST00000478216 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 LRFN2Q9ULH4 789 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 PLAGL2Q9UPG8 496 aa16.38■□□□□ 0.21
RC3H2-208ENST00000478216 MRPL42Q9Y6G3 142 aaKnown RBP16.38■□□□□ 0.21
RC3H2-208ENST00000478216 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
RC3H2-208ENST00000478216 DGKIO75912 1065 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
RC3H2-208ENST00000478216 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 ADAM15Q13444 863 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 SEC23AQ15436 765 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 PKN1Q16512 942 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 FBXO47Q5MNV8 452 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 SPOUT1Q5T280 376 aaKnown RBP16.37■□□□□ 0.21
RC3H2-208ENST00000478216 CYB5R4Q7L1T6 521 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 ADGRD2Q7Z7M1 963 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
RC3H2-208ENST00000478216 MICAL1Q8TDZ2 1067 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 EHMT1Q9H9B1 1298 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 ERAP1Q9NZ08 941 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 FRMPD4Q14CM0 1322 aa16.37■□□□□ 0.21
RC3H2-208ENST00000478216 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 ITGB1P05556 798 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 LINC00271P0C7V0 271 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 STAG3L1P0CL83 205 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 CD52P31358 61 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 ADAM17P78536 824 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 MRPS6P82932 125 aaKnown RBP16.36■□□□□ 0.21
RC3H2-208ENST00000478216 MGAT3Q09327 533 aa16.36■□□□□ 0.21
RC3H2-208ENST00000478216 SART3Q15020 963 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms