RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 SETD4Q9NVD3 440 aa11.16□□□□□ -0.62
CCM2-210ENST00000478169 RWDD3Q9Y3V2 267 aa11.16□□□□□ -0.62
CCM2-210ENST00000478169 ZNF318Q5VUA4 2279 aa11.16□□□□□ -0.62
CCM2-210ENST00000478169 NRCAMQ92823 1304 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 ERICH2A1L162 156 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 CYTH3O43739 400 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 TAF2Q6P1X5 1199 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 FIBCD1Q8N539 461 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
CCM2-210ENST00000478169 LMBR1Q8WVP7 490 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 OSBPL7Q9BZF2 842 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 KCNH6Q9H252 994 aa11.15□□□□□ -0.62
CCM2-210ENST00000478169 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
CCM2-210ENST00000478169 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 RBAK-RBAKDNI3L0D1 243 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 IFIT3O14879 490 aaKnown RBP11.14□□□□□ -0.63
CCM2-210ENST00000478169 CTNNB1P35222 781 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 BMPR1AP36894 532 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 ZP2Q05996 745 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 TROAPQ12815 778 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 SART3Q15020 963 aaKnown RBP11.14□□□□□ -0.63
CCM2-210ENST00000478169 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 EP400NLQ6ZTU2 488 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 ADHFE1Q8IWW8 467 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 CUL5Q93034 780 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 C11orf84Q9BUA3 381 aaPredicted RBP11.14□□□□□ -0.63
CCM2-210ENST00000478169 UPF3BQ9BZI7 483 aaKnown RBP11.14□□□□□ -0.63
CCM2-210ENST00000478169 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 RTEL1Q9NZ71 1219 aa11.14□□□□□ -0.63
CCM2-210ENST00000478169 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 IGHDP01880 384 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 CHRNA1P02708 482 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 RPLP2P05387 115 aaKnown RBP11.13□□□□□ -0.63
CCM2-210ENST00000478169 LINC00271P0C7V0 271 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 SMARCA1P28370 1054 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 LTBRP36941 435 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 WTAPQ15007 396 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 CTC1Q2NKJ3 1217 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
CCM2-210ENST00000478169 CATIPQ7Z7H3 387 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 RSPH3Q86UC2 560 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 TRIM50Q86XT4 487 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 NCOA7Q8NI08 942 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 SMARCC2Q8TAQ2 1214 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
CCM2-210ENST00000478169 UIMC1Q96RL1 719 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 IL25Q9H293 177 aa11.13□□□□□ -0.63
CCM2-210ENST00000478169 RC3H2Q9HBD1 1191 aaKnown RBP11.13□□□□□ -0.63
CCM2-210ENST00000478169 ADGRA3Q8IWK6 1321 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 KIAA1671Q9BY89 1806 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 ENPP3O14638 875 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 CYP21A2P08686 494 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 MGAT3Q09327 533 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 LPIN1Q14693 890 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 SMAD2Q15796 467 aaKnown RBP11.12□□□□□ -0.63
CCM2-210ENST00000478169 RALYLQ86SE5 291 aaKnown RBP11.12□□□□□ -0.63
CCM2-210ENST00000478169 ALYREFQ86V81 257 aaKnown RBP11.12□□□□□ -0.63
CCM2-210ENST00000478169 RUFY2Q8WXA3 655 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 SEPT1Q8WYJ6 367 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 ZNF689Q96CS4 500 aaPredicted RBP11.12□□□□□ -0.63
CCM2-210ENST00000478169 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
CCM2-210ENST00000478169 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 TRIOO75962 3097 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 C5orf42Q9H799 3197 aa11.12□□□□□ -0.63
CCM2-210ENST00000478169 TECTAO75443 2155 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 MBLAC1A4D2B0 266 aaPredicted RBP11.11□□□□□ -0.63
CCM2-210ENST00000478169 MEIS2O14770 477 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 GRM6O15303 877 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 GHRP10912 638 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 IRS1P35568 1242 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 TCF7P36402 384 aaPredicted RBP11.11□□□□□ -0.63
CCM2-210ENST00000478169 SP4Q02446 784 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 HYAL1Q12794 435 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 PPFIA1Q13136 1202 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 BTG3Q14201 252 aaPredicted RBP11.11□□□□□ -0.63
CCM2-210ENST00000478169 NAALADL2Q58DX5 795 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 USP17L6PQ6QN14 398 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 RUFY4Q6ZNE9 571 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 P2RX5Q93086 422 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
CCM2-210ENST00000478169 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 TELO2Q9Y4R8 837 aa11.11□□□□□ -0.63
CCM2-210ENST00000478169 EVPLQ92817 2033 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 E7EWF7 191 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 MAFGO15525 162 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 MBTPS2O43462 519 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 DGKIO75912 1065 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms