RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 HDAC6Q9UBN7 1215 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 F2P00734 622 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 LGALS2P05162 132 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 ZNF200P98182 395 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-205ENST00000477893 FUT2Q10981 343 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 JAKMIP3Q5VZ66 844 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 NLRX1Q86UT6 975 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 LAPTM4BQ86VI4 370 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 RETREG2Q8NC44 543 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 INPP4AQ96PE3 977 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-205ENST00000477893 KATNAL1Q9BW62 490 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 SLC26A6Q9BXS9 759 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 SEZ6LQ9BYH1 1024 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 FTOQ9C0B1 505 aaKnown RBP eCLIP9.49□□□□□ -0.89
ERCC8-205ENST00000477893 EHMT1Q9H9B1 1298 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 CXXC1Q9P0U4 656 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-205ENST00000477893 KIAA1468Q9P260 1216 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 CYP46A1Q9Y6A2 500 aa9.49□□□□□ -0.89
ERCC8-205ENST00000477893 SCN10AQ9Y5Y9 1956 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 CCDC196A0A1B0GTZ2 297 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 SPATA31C2B4DYI2 1134 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 DTNBO60941 627 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 ATP9AO75110 1047 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 STAM2O75886 525 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 FGBP02675 491 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 SCG2P13521 617 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 ITGB5P18084 799 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 SMAD3P84022 425 aaKnown RBP9.48□□□□□ -0.89
ERCC8-205ENST00000477893 AKAP17AQ02040 695 aaKnown RBP9.48□□□□□ -0.89
ERCC8-205ENST00000477893 MTMR1Q13613 665 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-205ENST00000477893 NEDD9Q14511 834 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 PFKFB3Q16875 520 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-205ENST00000477893 PPP1R18Q6NYC8 613 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 METTL7BQ6UX53 244 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 DHX38Q92620 1227 aaKnown RBP9.48□□□□□ -0.89
ERCC8-205ENST00000477893 GUCD1Q96NT3 240 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 USP26Q9BXU7 913 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 ANO3Q9BYT9 981 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 RIC8AQ9NPQ8 531 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 MTMR10Q9NXD2 777 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 BARHL2Q9NY43 387 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 GTF2IRD1Q9UHL9 959 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 DOCK5Q9H7D0 1870 aa9.48□□□□□ -0.89
ERCC8-205ENST00000477893 C17orf102A2RUQ5 167 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 DDX39AO00148 427 aaKnown RBP9.47□□□□□ -0.89
ERCC8-205ENST00000477893 ADAMTS3O15072 1205 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 CTSHP09668 335 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 SMIM10L2AP0DMW4 78 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 SMIM10L2BP0DMW5 78 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 TGFB3P10600 412 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 DNAJB2P25686 324 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 MARK3P27448 753 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 ICAM3P32942 547 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 ZNF76P36508 570 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 RABGGTBP53611 331 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-205ENST00000477893 BFSP2Q13515 415 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 HIC1Q14526 733 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 XRRA1Q6P2D8 792 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
ERCC8-205ENST00000477893 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 CYP2W1Q8TAV3 490 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 WNT8BQ93098 351 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 GPRASP2Q96D09 838 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 CTAGE1Q96RT6 745 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 GPR20Q99678 358 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 C16orf70Q9BSU1 422 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 MTIF3Q9H2K0 278 aaKnown RBP9.47□□□□□ -0.89
ERCC8-205ENST00000477893 TTYH1Q9H313 450 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-205ENST00000477893 PDRG1Q9NUG6 133 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 VPS54Q9P1Q0 977 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 SEPT9Q9UHD8 586 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-205ENST00000477893 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
ERCC8-205ENST00000477893 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 H3BRB1 525 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 hCG_1984214I3L0E3 225 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 HAS3O00219 553 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 CPLX1O14810 134 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 PPFIA4O75335 1185 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 IQCF3P0C7M6 154 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 KCNA2P16389 499 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 PDIA3P30101 505 aaKnown RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 TCF7P36402 384 aaPredicted RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 THPOP40225 353 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 RCAN1P53805 252 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 PKN1Q16512 942 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 LRRC8DQ7L1W4 858 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 SESTD1Q86VW0 696 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF713Q8N859 430 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms