RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CDCA3Q99618 268 aaPredicted RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 COL20A1Q9P218 1284 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 ATRXP46100 2492 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 CEP250Q9BV73 2442 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 WDR19Q8NEZ3 1342 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 C2CD4DB7Z1M9 353 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 SMIM10L2AP0DMW4 78 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 SMIM10L2BP0DMW5 78 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 AOC1P19801 751 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 TDO2P48775 406 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 RSPO4Q2I0M5 234 aaPredicted RBP8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 CCDC96Q2M329 555 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 CELF3Q5SZQ8 465 aaKnown RBP8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 ANKRD54Q6NXT1 300 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 CMTR2Q8IYT2 770 aaKnown RBP8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 MICAL1Q8TDZ2 1067 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 MAF1Q9H063 256 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 MFSD1Q9H3U5 465 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 NR2E1Q9Y466 385 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 MYH8P13535 1937 aa8.62□□□□□ -1.03
SPTLC1-205ENST00000477888 FSD2A1L4K1 749 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 H3BRB1 525 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 GPAA1O43292 621 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 PPFIA3O75145 1194 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 APPP05067 770 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 HOXB8P17481 243 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 GNAT2P19087 354 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 ERVFC1P60507 584 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 ADAM17P78536 824 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 COL9A2Q14055 689 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 ZKSCAN2Q63HK3 967 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 RTN4RL1Q86UN2 441 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 DCLK2Q8N568 766 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 DTWD2Q8NBA8 298 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 CYP2W1Q8TAV3 490 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 RASGRP4Q8TDF6 673 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 RUBCNQ92622 972 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 APPBP2Q92624 585 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 SPATA33Q96N06 139 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 APOL5Q9BWW9 433 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 GPCPD1Q9NPB8 672 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 CDH22Q9UJ99 828 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 MRVI1Q9Y6F6 885 aa8.61□□□□□ -1.03
SPTLC1-205ENST00000477888 FRMPD2Q68DX3 1309 aaPredicted RBP8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 TSPY2A6NKD2 308 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 FSCN2O14926 492 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 ASGR2P07307 311 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 SLC3A2P08195 630 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 NR3C2P08235 984 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 GHRP10912 638 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 RLBP1P12271 317 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 TECP42680 631 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 ATXN1P54253 815 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 SP2Q02086 613 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 UBE3AQ05086 875 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 PPARAQ07869 468 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 LPIN1Q14693 890 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 FLCNQ8NFG4 579 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 LINC01599Q8WXQ3 324 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 RTP3Q9BQQ7 232 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 POMKQ9H5K3 350 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 SETD4Q9NVD3 440 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 RALYQ9UKM9 306 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 R4GN57 208 aa8.6□□□□□ -1.03
SPTLC1-205ENST00000477888 PKD1L2Q7Z442 2459 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 ATG2AQ2TAZ0 1938 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 M0R2C6 588 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 SORBS3O60504 671 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 PDHBP11177 359 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 GNAT1P11488 350 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 MGAT3Q09327 533 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 USH1GQ495M9 461 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 ZDHHC14Q8IZN3 488 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 NECTIN4Q96NY8 510 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 TMEM47Q9BQJ4 181 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 ADAM7Q9H2U9 754 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 BCAS3Q9H6U6 928 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 SPTBN2O15020 2390 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 RALGAPA2Q2PPJ7 1873 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 OTOGLQ3ZCN5 2332 aa8.59□□□□□ -1.03
SPTLC1-205ENST00000477888 GPR179Q6PRD1 2367 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 ZNF316A6NFI3 1004 aaPredicted RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 RNF113AO15541 343 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 FGF18O76093 207 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 GGPS1O95749 300 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 LGALS2P05162 132 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 SRGAP2BP0DMP2 458 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 TGFB3P10600 412 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 TOP1P11387 765 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms