RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 LINC00301Q8NCQ3 95 aa22.5■■□□□ 1.19
ACTB-210ENST00000477812 SPC25Q9HBM1 224 aa22.5■■□□□ 1.19
ACTB-210ENST00000477812 PCDHA12Q9UN75 941 aa22.5■■□□□ 1.19
ACTB-210ENST00000477812 CEP131Q9UPN4 1083 aa22.5■■□□□ 1.19
ACTB-210ENST00000477812 ATP6V1DQ9Y5K8 247 aa22.5■■□□□ 1.19
ACTB-210ENST00000477812 IGKV6D-21A0A0A0MT36 114 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 EML1O00423 815 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 DNM1LO00429 736 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 YEATS4O95619 227 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 CEBPZQ03701 1054 aaKnown RBP22.49■■□□□ 1.19
ACTB-210ENST00000477812 GNASQ5JWF2 1037 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 ABHD15Q6UXT9 468 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 RNF180Q86T96 592 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 SMAP1Q8IYB5 467 aaPredicted RBP22.49■■□□□ 1.19
ACTB-210ENST00000477812 ARRDC4Q8NCT1 418 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 SEPT1Q8WYJ6 367 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 TMEM106CQ9BVX2 250 aa22.49■■□□□ 1.19
ACTB-210ENST00000477812 WDR64B1ANS9 1081 aa22.48■■□□□ 1.19
ACTB-210ENST00000477812 NOP56O00567 594 aaKnown RBP22.48■■□□□ 1.19
ACTB-210ENST00000477812 MARCH6O60337 910 aa22.48■■□□□ 1.19
ACTB-210ENST00000477812 PPFIA4O75335 1185 aa22.48■■□□□ 1.19
ACTB-210ENST00000477812 TCF7P36402 384 aaPredicted RBP22.48■■□□□ 1.19
ACTB-210ENST00000477812 IGSF22Q8N9C0 903 aa22.48■■□□□ 1.19
ACTB-210ENST00000477812 RDM1Q8NG50 284 aa22.48■■□□□ 1.19
ACTB-210ENST00000477812 PCYT2Q99447 389 aa22.48■■□□□ 1.19
ACTB-210ENST00000477812 FBXO2Q9UK22 296 aaPredicted RBP22.48■■□□□ 1.19
ACTB-210ENST00000477812 POTEMA6NI47 508 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 CHMP2AO43633 222 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 LGR5O75473 907 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 SUPT20HL2P0C7V6 817 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 CAPN2P17655 700 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 SFNP31947 248 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 JAK3P52333 1124 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 PURAQ00577 322 aaKnown RBP22.47■■□□□ 1.19
ACTB-210ENST00000477812 KCNA10Q16322 511 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 DGKDQ16760 1214 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 TNS4Q8IZW8 715 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 C16orf70Q9BSU1 422 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 TSEN34Q9BSV6 310 aaKnown RBP22.47■■□□□ 1.19
ACTB-210ENST00000477812 DISC1Q9NRI5 854 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 PHF24Q9UPV7 400 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 EMSYQ7Z589 1322 aa22.47■■□□□ 1.19
ACTB-210ENST00000477812 TFRCP02786 760 aaKnown RBP22.46■■□□□ 1.19
ACTB-210ENST00000477812 LGALS2P05162 132 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 TECP42680 631 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 GRIN1Q05586 938 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 BRDTQ58F21 947 aaPredicted RBP22.46■■□□□ 1.19
ACTB-210ENST00000477812 DTHD1Q6ZMT9 781 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 TRIM50Q86XT4 487 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 CCDC60Q8IWA6 550 aaPredicted RBP22.46■■□□□ 1.19
ACTB-210ENST00000477812 ANKLE1Q8NAG6 615 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 PCSK9Q8NBP7 692 aaKnown RBP22.46■■□□□ 1.19
ACTB-210ENST00000477812 KAT2BQ92831 832 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 TCEAL9Q9UHQ7 104 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 RCOR1Q9UKL0 485 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 CFAP45Q9UL16 551 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 PCDHA10Q9Y5I2 948 aa22.46■■□□□ 1.19
ACTB-210ENST00000477812 MOXD2PA6NHM9 499 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 KPNA6O60684 536 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 F2P00734 622 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 ASGR1P07306 291 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 ZNF286BP0CG31 522 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 MARCKSP29966 332 aaPredicted RBP22.45■■□□□ 1.18
ACTB-210ENST00000477812 ACLYP53396 1101 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 KRT85P78386 507 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 PDIA5Q14554 519 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 STK38Q15208 465 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 NCAPH2Q6IBW4 605 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 MIS18BP1Q6P0N0 1132 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 CXCL17Q6UXB2 119 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 MIER3Q7Z3K6 550 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 TNPO1Q92973 898 aaKnown RBP22.45■■□□□ 1.18
ACTB-210ENST00000477812 FERMT2Q96AC1 680 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 SRPRBQ9Y5M8 271 aaKnown RBP22.45■■□□□ 1.18
ACTB-210ENST00000477812 IGSF9BQ9UPX0 1349 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 SCN10AQ9Y5Y9 1956 aa22.45■■□□□ 1.18
ACTB-210ENST00000477812 VWA3AA6NCI4 1184 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 SPTLC2O15270 562 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 PPP6R2O75170 966 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 MYCNP04198 464 aaPredicted RBP22.44■■□□□ 1.18
ACTB-210ENST00000477812 COL6A1P12109 1028 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 EPHA7Q15375 998 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 TMEM266Q2M3C6 531 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 UBE2Q1Q7Z7E8 422 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 AFAP1L1Q8TED9 768 aa22.44■■□□□ 1.18
ACTB-210ENST00000477812 LEO1Q8WVC0 666 aaPredicted RBP22.44■■□□□ 1.18
ACTB-210ENST00000477812 TCHHQ07283 1943 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 KBTBD13C9JR72 458 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 HAS3O00219 553 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 ZEB2O60315 1214 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 PSAPP07602 524 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 MYL3P08590 195 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 EN2P19622 333 aaPredicted RBP22.43■■□□□ 1.18
ACTB-210ENST00000477812 UGCGQ16739 394 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 KCNG4Q8TDN1 519 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 DIS3LQ8TF46 1054 aaKnown RBP22.43■■□□□ 1.18
ACTB-210ENST00000477812 HSD17B14Q9BPX1 270 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 MAFBQ9Y5Q3 323 aaPredicted RBP22.43■■□□□ 1.18
ACTB-210ENST00000477812 WDR81Q562E7 1941 aa22.43■■□□□ 1.18
ACTB-210ENST00000477812 PP2D1A8MPX8 630 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms