RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 A0A1W2PQD8 194 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 SH2B2O14492 632 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 TIMM44O43615 452 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP9BO43861 1147 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 CTDNEP1O95476 244 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 HOXD12P35452 270 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 ZNF394Q53GI3 561 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 NCAPH2Q6IBW4 605 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 EXOC3L1Q86VI1 746 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 HOOK3Q86VS8 718 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 FSIP1Q8NA03 581 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 AZIN2Q96A70 460 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 PANK4Q9NVE7 773 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 A0A087WWV3 80 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 BIRC5O15392 142 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 P4HA2O15460 535 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 TNFRSF8P28908 595 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 LIFRP42702 1097 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 GOLGA8FQ08AF8 430 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 GOLGA8DPQ0D2H9 430 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 PDILTQ8N807 584 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 CRAMP1Q96RY5 1269 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 RETREG1Q9H6L5 497 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 GPHNQ9NQX3 736 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 NEDD4P46934 1319 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 CCT8L1PA6NM43 557 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 PAEPP09466 180 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 PCP11498 1178 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 USP11P51784 963 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 MECOMQ03112 1051 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 TMEM67Q5HYA8 995 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 OR52E8Q6IFG1 317 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 CYB5R4Q7L1T6 521 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 ADGRA1Q86SQ6 560 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 CTNNBL1Q8WYA6 563 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 TRIM11Q96F44 468 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 GDAP1L1Q96MZ0 367 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 ITM2BQ9Y287 266 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 IRS2Q9Y4H2 1338 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 MAP3K13O43283 966 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 MLH1P40692 756 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.23e-6■■□□□ 14.5
RTFDC1-207ENST00000477573 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 PPARAQ07869 468 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 OTUD6AQ7L8S5 288 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 ZNF554Q86TJ5 538 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 DZIP1Q86YF9 867 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 MLKLQ8NB16 471 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 C8orf76Q96K31 380 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP6V1G3Q96LB4 118 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 QPCTLQ9NXS2 382 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 ZSWIM5Q9P217 1185 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
RTFDC1-207ENST00000477573 EIF3FO00303 357 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 ACADSP16219 412 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 CD97P48960 835 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 GSTO1P78417 241 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 ITIH3Q06033 890 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 ITGB3BPQ13352 177 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 BYSLQ13895 437 aaKnown RBP13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 MAP7D1Q3KQU3 841 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 IRGCQ6NXR0 463 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 TMEM154Q6P9G4 183 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 NANOGNBQ7Z5D8 188 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 PEX5LQ8IYB4 626 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 CACTIN-AS1Q8N1I8 211 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 PTPRN2Q92932 1015 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 RMND1Q9NWS8 449 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 HPS5Q9UPZ3 1129 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 MAST2Q6P0Q8 1798 aa13.8□□□□□ -0.2
RTFDC1-207ENST00000477573 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 AKR1B15C9JRZ8 316 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 WDR46O15213 610 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ZBTB43O43298 467 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 UFL1O94874 794 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 CCT6AP40227 531 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms