RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RNF168Q8IYW5 571 aaPredicted RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 UBE2TQ9NPD8 197 aaPredicted RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 RBM6P78332 1123 aaKnown RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 UBE2SQ16763 222 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 PDE11AQ9HCR9 933 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 EFCAB6Q5THR3 1501 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 SAMD9LQ8IVG5 1584 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 EFCAB13Q8IY85 973 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 SMYD4Q8IYR2 804 aaPredicted RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 FAM49AQ9H0Q0 323 aaPredicted RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 ZBBXA8MT70 800 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 PRKAB2O43741 272 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 TRIP13Q15645 432 aaPredicted RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 PTPN21Q16825 1174 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 CIAPIN1Q6FI81 312 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 DYNLL2Q96FJ2 89 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 FOXP1Q9H334 677 aaPredicted RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 USP17L2Q6R6M4 530 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 ZMYND10O75800 440 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 SLC8A1P32418 973 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 CCT5P48643 541 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 ELMSAN1Q6PJG2 1045 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 ANGPTL8Q6UXH0 198 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 EXT2Q93063 718 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 P2RX5Q93086 422 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 TRIM4Q9C037 500 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 DHX36Q9H2U1 1008 aaKnown RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 TBK1Q9UHD2 729 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 ERVK-7P63135 1459 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 GNL1P36915 607 aaPredicted RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 PLTPP55058 493 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 RMDN2Q96LZ7 410 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 SUDS3Q9H7L9 328 aaPredicted RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 DNAJC8O75937 253 aaPredicted RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 ZMYM1Q5SVZ6 1142 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 LCORLQ8N3X6 602 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 CCDC197Q8NCU1 140 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 AK8Q96MA6 479 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 NUDCD1Q96RS6 583 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 PI4KBQ9UBF8 816 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 ATP8A1Q9Y2Q0 1164 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 GFPT2O94808 682 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 USP17L8P0C7I0 530 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 GCFC2P16383 781 aaKnown RBP20.06■□□□□ 0.8
VARS2-209ENST00000477288 C1orf228Q6PIY5 440 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 FTOQ9C0B1 505 aaKnown RBP eCLIP20.06■□□□□ 0.8
VARS2-209ENST00000477288 ITM2BQ9Y287 266 aa20.06■□□□□ 0.8
VARS2-209ENST00000477288 USP17L3A6NCW0 530 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 USP17L4A6NCW7 530 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 EIF2AK2P19525 551 aaKnown RBP20.05■□□□□ 0.8
VARS2-209ENST00000477288 ATP6V1E1P36543 226 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 USP17L1Q7RTZ2 530 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 PLEKHF1Q96S99 279 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 DBNLQ9UJU6 430 aaKnown RBP20.05■□□□□ 0.8
VARS2-209ENST00000477288 SLC13A4Q9UKG4 626 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 RPSAP08865 295 aaKnown RBP20.05■□□□□ 0.8
VARS2-209ENST00000477288 SPATS2Q86XZ4 545 aaKnown RBP20.05■□□□□ 0.8
VARS2-209ENST00000477288 SPZ1Q9BXG8 430 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 PRPSAP2O60256 369 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 EEF1B2P24534 225 aaKnown RBP20.05■□□□□ 0.8
VARS2-209ENST00000477288 HOXA13P31271 388 aaPredicted RBP20.05■□□□□ 0.8
VARS2-209ENST00000477288 SLC35F6Q8N357 371 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 DEPDC1BQ8WUY9 529 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 MTRQ99707 1265 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 MOSPD1Q9UJG1 213 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 SUFUQ9UMX1 484 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 TRAPPC10P48553 1259 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 DAAM1Q9Y4D1 1078 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 ABCC12Q96J65 1359 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 EPB41L5Q9HCM4 733 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 GCNT4Q9P109 453 aa20.05■□□□□ 0.8
VARS2-209ENST00000477288 WDR91A4D1P6 747 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 ECEL1O95672 775 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 YWHAHQ04917 246 aaPredicted RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 C2orf54Q08AI8 447 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 IFT88Q13099 833 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 CDC37Q16543 378 aaPredicted RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 APOA5Q6Q788 366 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 TRMT10CQ7L0Y3 403 aaKnown RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 ARMCX2Q7L311 632 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 CFLARO15519 480 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 NCF2P19878 526 aaPredicted RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 PCGF5Q86SE9 256 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 FBXL13Q8NEE6 735 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 VGLL3A8MV65 326 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 TRIM42Q8IWZ5 723 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 FAM133AQ8N9E0 248 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 COPRSQ9NQ92 184 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 KDM5DQ9BY66 1539 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 MYOM2P54296 1465 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 SLCO1A2P46721 670 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 NFX1Q12986 1120 aaKnown RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 TRIM67Q6ZTA4 783 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms