RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TTYH1Q9H313 450 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 ZMYM6O95789 1325 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 MYADML2A6NDP7 307 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 HIP1O00291 1037 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CD4P01730 458 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CSF2RAP15509 400 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 ITGB8P26012 769 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CENPCQ03188 943 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 PTPN11Q06124 597 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CLN3Q13286 438 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 DUSP28Q4G0W2 176 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 GPATCH4Q5T3I0 446 aaKnown RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CXCL17Q6UXB2 119 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 BTNL9Q6UXG8 535 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 RNF207Q6ZRF8 634 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 ZNF365Q70YC5 407 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 SLC43A3Q8NBI5 491 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 DNERQ8NFT8 737 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 ATXN2LQ8WWM7 1075 aaKnown RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 ESR2Q92731 530 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 SEC62Q99442 399 aaKnown RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 SLC4A7Q9Y6M7 1214 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 ZNF536O15090 1300 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 KIF28PB7ZC32 967 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 EPHB4P54760 987 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 BEX3Q00994 111 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 TRAF1Q13077 416 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 PPP2R5BQ15173 497 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 AAK1Q2M2I8 961 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 IQCA1Q86XH1 822 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 MORC4Q8TE76 937 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 MTG1Q9BT17 334 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-214ENST00000477152 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 KATNBL1Q9H079 304 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 WDR19Q8NEZ3 1342 aa8.49□□□□□ -1.05
BRCA1-214ENST00000477152 ICMTO60725 284 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 FGRP09769 529 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 ALDH5A1P51649 535 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 BFSP2Q13515 415 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 BAATQ14032 418 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 GRIN2CQ14957 1233 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 MCF2L2Q86YR7 1114 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 SCFD2Q8WU76 684 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 FGD4Q96M96 766 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 C2orf49Q9BVC5 232 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 RWDD1Q9H446 243 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 ZNF213O14771 459 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 MYL3P08590 195 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 CYP2C18P33260 490 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 NOVP48745 357 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 HDAC1Q13547 482 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 TTLL4Q14679 1199 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 TAPT1Q6NXT6 567 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 EEPD1Q7L9B9 569 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 FBXO16Q8IX29 292 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 ZDHHC1Q8WTX9 485 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 INSM2Q96T92 566 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-214ENST00000477152 TMEM47Q9BQJ4 181 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 PBX4Q9BYU1 374 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 IL17RBQ9NRM6 502 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 THEGQ9P2T0 379 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 PCDHA11Q9Y5I1 949 aa8.48□□□□□ -1.05
BRCA1-214ENST00000477152 LRRC37A2A6NM11 1700 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 FGAP02671 866 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 ACRP10323 421 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 CALML3P27482 149 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 PDE1AP54750 535 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 MUM1L1Q5H9M0 696 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 FAM47CQ5HY64 1035 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 NFRKBQ6P4R8 1299 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 PHOSPHO2Q8TCD6 241 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 RILPL2Q969X0 211 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 SLC9A7Q96T83 725 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 NOC4LQ9BVI4 516 aaKnown RBP8.47□□□□□ -1.05
BRCA1-214ENST00000477152 ALDH8A1Q9H2A2 487 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-214ENST00000477152 CTNNA3Q9UI47 895 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 TNKSO95271 1327 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 ABCB11O95342 1321 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 CCDC171Q6TFL3 1326 aa8.47□□□□□ -1.05
BRCA1-214ENST00000477152 RBM47A0AV96 593 aaKnown RBP8.46□□□□□ -1.05
BRCA1-214ENST00000477152 CTAGE5O15320 804 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 HSPD1P10809 573 aaKnown RBP8.46□□□□□ -1.05
BRCA1-214ENST00000477152 RRP1P56182 461 aaKnown RBP8.46□□□□□ -1.05
BRCA1-214ENST00000477152 MRPS5P82675 430 aaKnown RBP8.46□□□□□ -1.05
BRCA1-214ENST00000477152 FAM26DQ5JW98 314 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 ZNF295-AS1Q8N0V1 137 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 CHMP4CQ96CF2 233 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 KAT14Q9H8E8 782 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 DIAPH3Q9NSV4 1193 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.05
BRCA1-214ENST00000477152 FRMPD2Q68DX3 1309 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms