RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ICAM3P32942 547 aa32.25■■■□□ 2.75
VEGFA-211ENST00000476772 PSMC6P62333 389 aa32.25■■■□□ 2.75
VEGFA-211ENST00000476772 SEPT14Q6ZU15 432 aa32.25■■■□□ 2.75
VEGFA-211ENST00000476772 ABRAQ8N0Z2 381 aa32.25■■■□□ 2.75
VEGFA-211ENST00000476772 DOCK5Q9H7D0 1870 aa32.25■■■□□ 2.75
VEGFA-211ENST00000476772 PLXNA1Q9UIW2 1896 aa32.25■■■□□ 2.75
VEGFA-211ENST00000476772 STRNO43815 780 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 KLRC4O43908 158 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 PLA2G4BP0C869 781 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 IQCB1Q15051 598 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 TPH2Q8IWU9 490 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 DNM3Q9UQ16 869 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 CCNE2O96020 404 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 SSBP05455 408 aaKnown RBP eCLIP32.24■■■□□ 2.75
VEGFA-211ENST00000476772 MAPK4P31152 587 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 KRT76Q01546 638 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 UVSSAQ2YD98 709 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 ZNF784Q8NCA9 323 aaPredicted RBP32.24■■■□□ 2.75
VEGFA-211ENST00000476772 NEK9Q8TD19 979 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 RMND1Q9NWS8 449 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 TCEAL9Q9UHQ7 104 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 NFASCO94856 1347 aa32.24■■■□□ 2.75
VEGFA-211ENST00000476772 COBLO75128 1261 aa32.23■■■□□ 2.75
VEGFA-211ENST00000476772 YY1P25490 414 aa32.23■■■□□ 2.75
VEGFA-211ENST00000476772 ASIC1P78348 528 aa32.23■■■□□ 2.75
VEGFA-211ENST00000476772 ZNF792Q3KQV3 632 aa32.23■■■□□ 2.75
VEGFA-211ENST00000476772 BCAS3Q9H6U6 928 aa32.23■■■□□ 2.75
VEGFA-211ENST00000476772 SAMM50Q9Y512 469 aa32.23■■■□□ 2.75
VEGFA-211ENST00000476772 TM4SF4P48230 202 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 KMT5BQ4FZB7 885 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 EEPD1Q7L9B9 569 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 PLEKHH3Q7Z736 793 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 BANK1Q8NDB2 785 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 BPIFA3Q9BQP9 254 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 LXNQ9BS40 222 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 LRRC27Q9C0I9 530 aa32.22■■■□□ 2.75
VEGFA-211ENST00000476772 WRAP73Q9P2S5 460 aaPredicted RBP32.22■■■□□ 2.75
VEGFA-211ENST00000476772 TLR2O60603 784 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 MUTP22033 750 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 SLC12A3P55017 1021 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 GRB14Q14449 540 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 KCNB1Q14721 858 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 DHX40Q8IX18 779 aaKnown RBP32.21■■■□□ 2.75
VEGFA-211ENST00000476772 KCTD17Q8N5Z5 321 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 MLKLQ8NB16 471 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 MORC4Q8TE76 937 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 ZFYVE28Q9HCC9 887 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 MCM3APO60318 1980 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 LOC102724159A0A0B4J2E5 919 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 WDR64B1ANS9 1081 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 JAK3P52333 1124 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 SP2Q02086 613 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 PWP2Q15269 919 aaKnown RBP32.21■■■□□ 2.75
VEGFA-211ENST00000476772 ZNF746Q6NUN9 644 aaPredicted RBP32.21■■■□□ 2.75
VEGFA-211ENST00000476772 C17orf99Q6UX52 265 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 DYMQ7RTS9 669 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 AOPEPQ8N6M6 819 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 DDX12PQ92771 950 aa32.21■■■□□ 2.75
VEGFA-211ENST00000476772 P4HBP07237 508 aaKnown RBP32.2■■■□□ 2.74
VEGFA-211ENST00000476772 SFNP31947 248 aa32.2■■■□□ 2.74
VEGFA-211ENST00000476772 SENP7Q9BQF6 1050 aa32.2■■■□□ 2.74
VEGFA-211ENST00000476772 JPH1Q9HDC5 661 aaPredicted RBP32.2■■■□□ 2.74
VEGFA-211ENST00000476772 CNNM4Q6P4Q7 775 aa32.19■■■□□ 2.74
VEGFA-211ENST00000476772 GPBP1Q86WP2 473 aa32.19■■■□□ 2.74
VEGFA-211ENST00000476772 SMYD4Q8IYR2 804 aaPredicted RBP32.19■■■□□ 2.74
VEGFA-211ENST00000476772 SYT2Q8N9I0 419 aaPredicted RBP32.19■■■□□ 2.74
VEGFA-211ENST00000476772 PIGOQ8TEQ8 1089 aa32.19■■■□□ 2.74
VEGFA-211ENST00000476772 DACH1Q9UI36 760 aa32.19■■■□□ 2.74
VEGFA-211ENST00000476772 ASB14A6NK59 587 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 SORBS3O60504 671 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 RHOBTB3O94955 611 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 EYA4O95677 639 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 CRHR2Q13324 411 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 BHMT2Q9H2M3 363 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 SLC9A2Q9UBY0 812 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 ZNF236Q9UL36 1845 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 BECN2A8MW95 431 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 CYP11B2P19099 503 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 ZNF658Q5TYW1 1059 aaPredicted RBP32.18■■■□□ 2.74
VEGFA-211ENST00000476772 RDM1Q8NG50 284 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 TELO2Q9Y4R8 837 aa32.18■■■□□ 2.74
VEGFA-211ENST00000476772 ECM2O94769 699 aaPredicted RBP32.17■■■□□ 2.74
VEGFA-211ENST00000476772 CD44P16070 742 aaKnown RBP32.17■■■□□ 2.74
VEGFA-211ENST00000476772 UBA1P22314 1058 aaKnown RBP32.17■■■□□ 2.74
VEGFA-211ENST00000476772 UNC13DQ70J99 1090 aa32.17■■■□□ 2.74
VEGFA-211ENST00000476772 ARMCX2Q7L311 632 aa32.17■■■□□ 2.74
VEGFA-211ENST00000476772 FBXO16Q8IX29 292 aaPredicted RBP32.17■■■□□ 2.74
VEGFA-211ENST00000476772 CCDC47Q96A33 483 aaKnown RBP32.17■■■□□ 2.74
VEGFA-211ENST00000476772 DNAJC19Q96DA6 116 aa32.17■■■□□ 2.74
VEGFA-211ENST00000476772 NACC1Q96RE7 527 aa32.17■■■□□ 2.74
VEGFA-211ENST00000476772 EXOC1Q9NV70 894 aa32.17■■■□□ 2.74
VEGFA-211ENST00000476772 GDAQ9Y2T3 454 aa32.17■■■□□ 2.74
VEGFA-211ENST00000476772 ZBTB39O15060 712 aa32.16■■■□□ 2.74
VEGFA-211ENST00000476772 SP4Q02446 784 aa32.16■■■□□ 2.74
VEGFA-211ENST00000476772 CYFIP1Q7L576 1253 aa32.16■■■□□ 2.74
VEGFA-211ENST00000476772 DPP9Q86TI2 863 aa32.16■■■□□ 2.74
VEGFA-211ENST00000476772 SMAP1Q8IYB5 467 aaPredicted RBP32.16■■■□□ 2.74
VEGFA-211ENST00000476772 ZSWIM4Q9H7M6 989 aa32.16■■■□□ 2.74
VEGFA-211ENST00000476772 CREBZFQ9NS37 354 aa32.16■■■□□ 2.74
VEGFA-211ENST00000476772 SLC15A5A6NIM6 579 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms