RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PURBQ96QR8 312 aaKnown RBP18.21■□□□□ 0.51
TMEM53-208ENST00000476724 SYT17Q9BSW7 474 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 GLIS2Q9BZE0 524 aaPredicted RBP18.21■□□□□ 0.51
TMEM53-208ENST00000476724 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 MSL3Q8N5Y2 521 aaKnown RBP18.21■□□□□ 0.51
TMEM53-208ENST00000476724 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 KIAA1024Q9UPX6 916 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 TMX2Q9Y320 296 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 COL4A3BPQ9Y5P4 624 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 PITPNM2Q9BZ72 1349 aa18.21■□□□□ 0.5
TMEM53-208ENST00000476724 PHF20L1A8MW92 1017 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 LCA5LO95447 670 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 PLA2G4BP0C869 781 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 BMP3P12645 472 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 CKAP4Q07065 602 aaKnown RBP18.2■□□□□ 0.5
TMEM53-208ENST00000476724 TNFAIP1Q13829 316 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 TEX2Q8IWB9 1127 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 CRYGNQ8WXF5 182 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 NUCKS1Q9H1E3 243 aaKnown RBP18.2■□□□□ 0.5
TMEM53-208ENST00000476724 MMRN2Q9H8L6 949 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
TMEM53-208ENST00000476724 MEIS2O14770 477 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 ZYXQ15942 572 aaKnown RBP18.19■□□□□ 0.5
TMEM53-208ENST00000476724 Q4G0T1 1027 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 ZNF771Q7L3S4 317 aaPredicted RBP18.19■□□□□ 0.5
TMEM53-208ENST00000476724 TXLNBQ8N3L3 684 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 DEFB129Q9H1M3 183 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 GPRC5DQ9NZD1 345 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 MAP2K7O14733 419 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 SASH3O75995 380 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 MARSP56192 900 aaKnown RBP18.19■□□□□ 0.5
TMEM53-208ENST00000476724 ARHGAP4P98171 946 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 LRRC41Q15345 812 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 NBPF12Q5TAG4 269 aaPredicted RBP18.19■□□□□ 0.5
TMEM53-208ENST00000476724 FBXO11Q86XK2 927 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 NEK11Q8NG66 645 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 ERMNQ8TAM6 284 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 SMCHD1A6NHR9 2005 aa18.19■□□□□ 0.5
TMEM53-208ENST00000476724 E9PMD0 336 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 TRAF5O00463 557 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 SSBP05455 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 TAL1P17542 331 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 MCM3P25205 808 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 EPS15P42566 896 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 TRAF1Q13077 416 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 IKQ13123 557 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 BEND6Q5SZJ8 279 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 HDXQ7Z353 690 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 FAM20AQ96MK3 541 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 FAM207AQ9NSI2 230 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 PCDHA2Q9Y5H9 948 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 NKRFO15226 690 aaKnown RBP eCLIP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 ATP1A1P05023 1023 aaKnown RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 POLR2AP24928 1970 aaKnown RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 SMC1AQ14683 1233 aaKnown RBP18.18■□□□□ 0.5
TMEM53-208ENST00000476724 CCDC40Q4G0X9 1142 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 WDR93Q6P2C0 686 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 GPBP1Q86WP2 473 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 GPC2Q8N158 579 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 KCTD17Q8N5Z5 321 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 TRIM58Q8NG06 486 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 ARHGAP20Q9P2F6 1191 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 FAM184BQ9ULE4 1060 aa18.18■□□□□ 0.5
TMEM53-208ENST00000476724 SSU72P8A0A1W2PR75 194 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 FRMD3A2A2Y4 597 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 RCCD1A6NED2 376 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 CYP11B2P19099 503 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 HIRAP54198 1017 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-208ENST00000476724 GPS2Q13227 327 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 HERC4Q5GLZ8 1057 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-208ENST00000476724 FAM83BQ5T0W9 1011 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 SYDE2Q5VT97 1194 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 NCAPH2Q6IBW4 605 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 BTNL9Q6UXG8 535 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 ETNPPLQ8TBG4 499 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 SYN2Q92777 582 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-208ENST00000476724 GJA10Q969M2 543 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 PNKPQ96T60 521 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 DEF6Q9H4E7 631 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 PCDHA13Q9Y5I0 950 aa18.17■□□□□ 0.5
TMEM53-208ENST00000476724 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 ENC1O14682 589 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 DDNO94850 711 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-208ENST00000476724 CIITAP33076 1130 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 SREBF1P36956 1147 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 KIF11P52732 1056 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 EDRF1Q3B7T1 1238 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 CACNA2D4Q7Z3S7 1137 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 BAP1Q92560 729 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
TMEM53-208ENST00000476724 ST7Q9NRC1 585 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 EMILIN3Q9NT22 766 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms