RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 COA7Q96BR5 231 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 CHMP4CQ96CF2 233 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 GCC1Q96CN9 775 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 FAM227BQ96M60 508 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
CHD6-207ENST00000476641 CEP41Q9BYV8 373 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 TANGO6Q9C0B7 1094 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHD6-207ENST00000476641 FBXO28Q9NVF7 368 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 ARPP21Q9UBL0 812 aaPredicted RBP9.43□□□□□ -0.9
CHD6-207ENST00000476641 STAP2Q9UGK3 403 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 RNF114Q9Y508 228 aa9.43□□□□□ -0.9
CHD6-207ENST00000476641 A0A0D9SFI3 127 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
CHD6-207ENST00000476641 SBK1Q52WX2 424 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 WDR78Q5VTH9 848 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 ACAD11Q709F0 780 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 GPR142Q7Z601 462 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
CHD6-207ENST00000476641 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 ATG4CQ96DT6 458 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 DEFB118Q96PH6 123 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 TMX2Q9Y320 296 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 TRIOBPQ9H2D6 2365 aa9.42□□□□□ -0.9
CHD6-207ENST00000476641 MYH7P12883 1935 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 ROBO3Q96MS0 1386 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 PATL2C9JE40 543 aaKnown RBP9.41□□□□□ -0.9
CHD6-207ENST00000476641 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 GJB1P08034 283 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 CD68P34810 354 aaPredicted RBP9.41□□□□□ -0.9
CHD6-207ENST00000476641 GRIK1P39086 918 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 GJA8P48165 433 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 UBXN2AP68543 259 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 FAM47AQ5JRC9 791 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 FAM83BQ5T0W9 1011 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 TXNDC11Q6PKC3 985 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 RASGRP2Q7LDG7 609 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 PLEKHH3Q7Z736 793 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 CHD1LQ86WJ1 897 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 AMOTL1Q8IY63 956 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
CHD6-207ENST00000476641 U2AF1L4Q8WU68 220 aaKnown RBP9.41□□□□□ -0.9
CHD6-207ENST00000476641 USP6NLQ92738 828 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
CHD6-207ENST00000476641 CCDC17Q96LX7 622 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 C7orf69Q9H7B7 122 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 VCPKMTQ9H867 229 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
CHD6-207ENST00000476641 MGAMO43451 1857 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.9
CHD6-207ENST00000476641 IGKV6D-41A0A0C4DH26 115 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 FLOT1O75955 427 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 HMGCRP04035 888 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 SPINK2P20155 84 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 NUCB1Q02818 461 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 PPARAQ07869 468 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 NMIQ13287 307 aaPredicted RBP9.4□□□□□ -0.9
CHD6-207ENST00000476641 COX20Q5RI15 118 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 GIMAP6Q6P9H5 292 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 LBX2Q6XYB7 198 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 TRIM42Q8IWZ5 723 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 LRRC47Q8N1G4 583 aaKnown RBP9.4□□□□□ -0.9
CHD6-207ENST00000476641 NPLOC4Q8TAT6 608 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 EVI5LQ96CN4 794 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 CEP95Q96GE4 821 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 MOV10L1Q9BXT6 1211 aaKnown RBP9.4□□□□□ -0.9
CHD6-207ENST00000476641 LACRTQ9GZZ8 138 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHD6-207ENST00000476641 RWDD1Q9H446 243 aaPredicted RBP9.4□□□□□ -0.9
CHD6-207ENST00000476641 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 KCNK4Q9NYG8 393 aa9.4□□□□□ -0.9
CHD6-207ENST00000476641 PLXNB2O15031 1838 aa9.4□□□□□ -0.91
CHD6-207ENST00000476641 NMT2O60551 498 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 NDUFB10O96000 172 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 GNAT2P19087 354 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 CCND3P30281 292 aaPredicted RBP9.39□□□□□ -0.91
CHD6-207ENST00000476641 MAPK4P31152 587 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 PLS1Q14651 629 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 COG2Q14746 738 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 TMEM132BQ14DG7 1078 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
CHD6-207ENST00000476641 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 CCAR1Q8IX12 1150 aaKnown RBP9.39□□□□□ -0.91
CHD6-207ENST00000476641 SOCS4Q8WXH5 440 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 RILPL2Q969X0 211 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CHD6-207ENST00000476641 NAPBQ9H115 298 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 PAK6Q9NQU5 681 aaPredicted RBP9.39□□□□□ -0.91
CHD6-207ENST00000476641 CLIP2Q9UDT6 1046 aa9.39□□□□□ -0.91
CHD6-207ENST00000476641 WDR46O15213 610 aaKnown RBP9.38□□□□□ -0.91
CHD6-207ENST00000476641 FARP2O94887 1054 aaPredicted RBP9.38□□□□□ -0.91
CHD6-207ENST00000476641 SGPL1O95470 568 aa9.38□□□□□ -0.91
CHD6-207ENST00000476641 TFRCP02786 760 aaKnown RBP9.38□□□□□ -0.91
CHD6-207ENST00000476641 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
CHD6-207ENST00000476641 ERCC3P19447 782 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms