RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GATMP50440 423 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 NHLH1Q02575 133 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 PTH1RQ03431 593 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 MGAT3Q09327 533 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 CAMK1Q14012 370 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 LPIN1Q14693 890 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 COL19A1Q14993 1142 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 CCDC178Q5BJE1 867 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 USP17L6PQ6QN14 398 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 ADGRD2Q7Z7M1 963 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 FIBCD1Q8N539 461 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 KRT23Q9C075 422 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 MAF1Q9H063 256 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 RIOX1Q9H6W3 641 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 ALG13Q9NP73 1137 aaKnown RBP13.86□□□□□ -0.19
HDAC6-219ENST00000476625 MBTPS2O43462 519 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 ATP9AO75110 1047 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 IBSPP21815 317 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-219ENST00000476625 NUCB1Q02818 461 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
HDAC6-219ENST00000476625 IL17RAQ96F46 866 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 SAMD11Q96NU1 681 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 INPP4AQ96PE3 977 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-219ENST00000476625 OSBPL3Q9H4L5 887 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
HDAC6-219ENST00000476625 CYP21A2P08686 494 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 ALADP13716 330 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
HDAC6-219ENST00000476625 PDE4AP27815 886 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 ICAM3P32942 547 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 ANTXR2P58335 489 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
HDAC6-219ENST00000476625 TMEM62Q0P6H9 643 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 CTC1Q2NKJ3 1217 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
HDAC6-219ENST00000476625 FAM26DQ5JW98 314 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 METTL7BQ6UX53 244 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 RAB11FIP4Q86YS3 637 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 ADHFE1Q8IWW8 467 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 DNAJB3Q8WWF6 145 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
HDAC6-219ENST00000476625 CTNNA3Q9UI47 895 aa13.84□□□□□ -0.19
HDAC6-219ENST00000476625 MRPL42Q9Y6G3 142 aaKnown RBP13.84□□□□□ -0.19
HDAC6-219ENST00000476625 FNDC1Q4ZHG4 1894 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-219ENST00000476625 MUC6Q6W4X9 2439 aa13.83□□□□□ -0.19
HDAC6-219ENST00000476625 TTC3P53804 2025 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 PNMA6FA0A0J9YX94 578 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 GSTTP1A0A1W2PQM5 241 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 ENPP3O14638 875 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 IFIT3O14879 490 aaKnown RBP13.83□□□□□ -0.2
HDAC6-219ENST00000476625 TGFB3P10600 412 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-219ENST00000476625 BMPR1AP36894 532 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 IGBP1P78318 339 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 TROAPQ12815 778 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 MARCH8Q5T0T0 291 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 RTN4RL1Q86UN2 441 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-219ENST00000476625 EXOC6Q8TAG9 804 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 USP26Q9BXU7 913 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-219ENST00000476625 CNNM2Q9H8M5 875 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 EHMT1Q9H9B1 1298 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 HCSTQ9UBK5 93 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 CDY2AQ9Y6F7 541 aa13.83□□□□□ -0.2
HDAC6-219ENST00000476625 C5orf67F2Z3F1 127 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 MEIS2O14770 477 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 FIBPO43427 364 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 PLEKHA8P1O95397 391 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 RXRAP19793 462 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 CD52P31358 61 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 BTG3Q14201 252 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-219ENST00000476625 SMAD2Q15796 467 aaKnown RBP13.82□□□□□ -0.2
HDAC6-219ENST00000476625 UBE2SQ16763 222 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 PUS10Q3MIT2 529 aaKnown RBP13.82□□□□□ -0.2
HDAC6-219ENST00000476625 IER5LQ5T953 404 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 PRSS33Q8NF86 280 aa13.82□□□□□ -0.2
HDAC6-219ENST00000476625 ZNF689Q96CS4 500 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-219ENST00000476625 MAP3K20Q9NYL2 800 aaKnown RBP13.82□□□□□ -0.2
HDAC6-219ENST00000476625 ZNF318Q5VUA4 2279 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 E7EWF7 191 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 CAND2O75155 1236 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 KCNA2P16389 499 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 PPFIA1Q13136 1202 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 NEDD9Q14511 834 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 WTAPQ15007 396 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 GRIK4Q16099 956 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 FBXO47Q5MNV8 452 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 RBM23Q86U06 439 aaKnown RBP13.81□□□□□ -0.2
HDAC6-219ENST00000476625 SMARCC2Q8TAQ2 1214 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 APBB2Q92870 758 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 CLEC1BQ9P126 229 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 BARX2Q9UMQ3 279 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms