RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 TLR9Q9NR96 1032 aa9.4□□□□□ -0.9
IRF1-209ENST00000476613 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
IRF1-209ENST00000476613 ZNF213O14771 459 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 TREHO43280 583 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 DGKIO75912 1065 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 NR3C2P08235 984 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 GHRHRQ02643 423 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 BTG3Q14201 252 aaPredicted RBP9.39□□□□□ -0.91
IRF1-209ENST00000476613 CMTR2Q8IYT2 770 aaKnown RBP9.39□□□□□ -0.91
IRF1-209ENST00000476613 SUSD6Q92537 303 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 SPATA33Q96N06 139 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 CDCA3Q99618 268 aaPredicted RBP9.39□□□□□ -0.91
IRF1-209ENST00000476613 USP26Q9BXU7 913 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 RNPEPQ9H4A4 650 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 INCENPQ9NQS7 918 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 PXMP2Q9NR77 195 aa9.39□□□□□ -0.91
IRF1-209ENST00000476613 MRPL11Q9Y3B7 192 aaKnown RBP9.39□□□□□ -0.91
IRF1-209ENST00000476613 CFAP54Q96N23 3096 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 ENPP3O14638 875 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 SGSM2O43147 1006 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 SMIM10L2AP0DMW4 78 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 SMIM10L2BP0DMW5 78 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 ADAM17P78536 824 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 UBE3AQ05086 875 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 USH1GQ495M9 461 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 UBALD2Q8IYN6 164 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 SPPL3Q8TCT6 385 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 TBC1D5Q92609 795 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 NKD2Q969F2 451 aaPredicted RBP9.38□□□□□ -0.91
IRF1-209ENST00000476613 RPGRIP1Q96KN7 1286 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 RNF41Q9H4P4 317 aaPredicted RBP9.38□□□□□ -0.91
IRF1-209ENST00000476613 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 COL20A1Q9P218 1284 aa9.38□□□□□ -0.91
IRF1-209ENST00000476613 KDM4AO75164 1064 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 RGS20O76081 388 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 GGPS1O95749 300 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 GLP2RO95838 553 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 RPLP2P05387 115 aaKnown RBP9.37□□□□□ -0.91
IRF1-209ENST00000476613 ITGB1P05556 798 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 CTSHP09668 335 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 SRGAP2BP0DMP2 458 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
IRF1-209ENST00000476613 NRIP1P48552 1158 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 HSD17B4P51659 736 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
IRF1-209ENST00000476613 IMMTQ16891 758 aaKnown RBP9.37□□□□□ -0.91
IRF1-209ENST00000476613 PDE12Q6L8Q7 609 aaKnown RBP9.37□□□□□ -0.91
IRF1-209ENST00000476613 TAF2Q6P1X5 1199 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 TMEM184AQ6ZMB5 413 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 MFSD6Q6ZSS7 791 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 POF1BQ8WVV4 589 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 OSBPL7Q9BZF2 842 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 MLXIPQ9HAP2 919 aa9.37□□□□□ -0.91
IRF1-209ENST00000476613 NRCAMQ92823 1304 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 LGALS2P05162 132 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 DNAJB1P25685 340 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 CCDC178Q5BJE1 867 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 CASC1Q6TDU7 716 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 STOX1Q6ZVD7 989 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 ADGRD2Q7Z7M1 963 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 RSPH3Q86UC2 560 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 VSIG10LQ86VR7 867 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 DGKHQ86XP1 1220 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 ADSSL1Q8N142 457 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 KLHL23Q8NBE8 558 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 MAP4K1Q92918 833 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 NEK1Q96PY6 1258 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 PDCD2LQ9BRP1 358 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 FTHL17Q9BXU8 183 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 IL25Q9H293 177 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
IRF1-209ENST00000476613 BARX2Q9UMQ3 279 aaPredicted RBP9.36□□□□□ -0.91
IRF1-209ENST00000476613 SORCS3Q9UPU3 1222 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 NR2E1Q9Y466 385 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 SQORQ9Y6N5 450 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 U3KPZ7 1027 aaPredicted RBP9.36□□□□□ -0.91
IRF1-209ENST00000476613 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
IRF1-209ENST00000476613 C5orf42Q9H799 3197 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 MYH7BA7E2Y1 1941 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 NOP56O00567 594 aaKnown RBP9.35□□□□□ -0.91
IRF1-209ENST00000476613 STAM2O75886 525 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 TRIOO75962 3097 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 CHRNA1P02708 482 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 STAG3L1P0CL83 205 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
IRF1-209ENST00000476613 CLCN5P51795 746 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 HAND2P61296 217 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 SP2Q02086 613 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 PTH1RQ03431 593 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 MGAT3Q09327 533 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 MTMR3Q13615 1198 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 NEDD9Q14511 834 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 DUSP6Q16828 381 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 ASPRV1Q53RT3 343 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 TSHZ1Q6ZSZ6 1077 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 ZBTB33Q86T24 672 aa9.35□□□□□ -0.91
IRF1-209ENST00000476613 NPAS4Q8IUM7 802 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms