RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ADCY7P51828 1080 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 SESN3P58005 492 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TSGA10IPQ3SY00 556 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 SLC9C1Q4G0N8 1177 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 EPC2Q52LR7 807 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 SFMBT2Q5VUG0 894 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 LMBRD2Q68DH5 695 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF804AQ7Z570 1209 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PPP1R13LQ8WUF5 828 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 GSDMAQ96QA5 445 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 FUT8Q9BYC5 575 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 BCAS3Q9H6U6 928 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 RGL1Q9NZL6 768 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 LIMA1Q9UHB6 759 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ABCC6O95255 1503 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 KRIT1O00522 736 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 SPOPO43791 374 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PIAS1O75925 651 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 IFNB1P01574 187 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CYP2C19P33261 490 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CARSP49589 748 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 MESDQ14696 234 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 NR1I3Q14994 352 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 NAA25Q14CX7 972 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 FAM26FQ5R3K3 315 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF658Q5TYW1 1059 aaPredicted RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 GDAP1Q8TB36 358 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 TCP11Q8WWU5 503 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 LARP4BQ92615 738 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 ARL8AQ96BM9 186 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 NDST4Q9H3R1 872 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PSTPIP2Q9H939 334 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 RBM12Q9NTZ6 932 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 RBM28Q9NW13 759 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 TMOD4Q9NZQ9 345 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 DDX25Q9UHL0 483 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 ATP6V0A2Q9Y487 856 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PPP1R3GB7ZBB8 358 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 ALDH1B1P30837 517 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 LIFRP42702 1097 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 MAP3K9P80192 1104 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 NNTQ13423 1086 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 RPS6KA1Q15418 735 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 SEPT7Q16181 437 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 GSTA5Q7RTV2 222 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 FAM114A1Q8IWE2 563 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CNKSR1Q969H4 720 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CABS1Q96KC9 395 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 MED15Q96RN5 788 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 TCHPQ9BT92 498 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 BHMT2Q9H2M3 363 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 RRAGCQ9HB90 399 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 DDX4Q9NQI0 724 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 TUBE1Q9UJT0 475 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PCDHA13Q9Y5I0 950 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 BICDL2A1A5D9 508 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 WDR91A4D1P6 747 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 MYO1FO00160 1098 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 ZBTB39O15060 712 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 EXOC3O60645 756 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 KIF4AO95239 1232 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PPP1R7Q15435 360 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC93Q567U6 631 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CNNM4Q6P4Q7 775 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 FAM47EQ6ZV65 393 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 MYOCDQ8IZQ8 938 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 MDM1Q8TC05 714 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 GLIS2Q9BZE0 524 aaPredicted RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 ANKZF1Q9H8Y5 726 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 AMACRQ9UHK6 382 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PCDHA4Q9UN74 947 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 NOVA2Q9UNW9 492 aaKnown RBP5.47□□□□□ -1.53
CCDC39-204ENST00000476379 CNTRLQ7Z7A1 2325 aa5.47□□□□□ -1.53
CCDC39-204ENST00000476379 PDE2AO00408 941 aaPredicted RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 GBP2P32456 591 aaPredicted RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 DNM2P50570 870 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 TRIM28Q13263 835 aaKnown RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 BRD3Q15059 726 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 SF3B3Q15393 1217 aaKnown RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF394Q53GI3 561 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 ANGEL2Q5VTE6 544 aaKnown RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 TRIM68Q6AZZ1 485 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 RBM43Q6ZSC3 357 aaKnown RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC121Q6ZUS5 278 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 RFX8Q6ZV50 586 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 EEPD1Q7L9B9 569 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 VPS36Q86VN1 386 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 PPM1KQ8N3J5 372 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 VGLL2Q8N8G2 317 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 ZKSCAN4Q969J2 545 aaPredicted RBP5.46□□□□□ -1.53
CCDC39-204ENST00000476379 HAUS4Q9H6D7 363 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 ACP6Q9NPH0 428 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.53
CCDC39-204ENST00000476379 POTEB2H3BUK9 544 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 SLC37A4O43826 429 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 ACSL3O95573 720 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 IVLP07476 585 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 AKR1B1P15121 316 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 H2AFXP16104 143 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms