RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ABRAQ8N0Z2 381 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 IL31RAQ8NI17 732 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
MRPL55-227ENST00000475832 PLIN2Q99541 437 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-227ENST00000475832 EFCC1Q9HA90 598 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 TUFT1Q9NNX1 390 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 VAV3Q9UKW4 847 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 DNM3Q9UQ16 869 aa13.69□□□□□ -0.22
MRPL55-227ENST00000475832 ASB14A6NK59 587 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 BECN2A8MW95 431 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 BIN1O00499 593 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 CHMP2AO43633 222 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 DKC1O60832 514 aaKnown RBP eCLIP13.68□□□□□ -0.22
MRPL55-227ENST00000475832 SFNP31947 248 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 JAK3P52333 1124 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 GRB10Q13322 594 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 ARHGEF6Q15052 776 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 EPHA7Q15375 998 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 Q3C1V9 767 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 TMEM119Q4V9L6 283 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 CT47A1Q5JQC4 288 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-227ENST00000475832 NT5DC1Q5TFE4 455 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 KCNV1Q6PIU1 500 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 FAM133AQ8N9E0 248 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 MLKLQ8NB16 471 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 RNF214Q8ND24 703 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 GIMAP8Q8ND71 665 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-227ENST00000475832 RDM1Q8NG50 284 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 RAD54LQ92698 747 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 GJA10Q969M2 543 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-227ENST00000475832 UIMC1Q96RL1 719 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 MMTAG2Q9BU76 263 aaKnown RBP13.68□□□□□ -0.22
MRPL55-227ENST00000475832 ARHGAP39Q9C0H5 1083 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 DNAJC25Q9H1X3 360 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
MRPL55-227ENST00000475832 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 SPIRE1Q08AE8 756 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 DPYDQ12882 1025 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 KIF22Q14807 665 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 GRAMD1CQ8IYS0 662 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-227ENST00000475832 ARMC5Q96C12 935 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-227ENST00000475832 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 PNMA5Q96PV4 448 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
MRPL55-227ENST00000475832 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
MRPL55-227ENST00000475832 PKD2L1Q9P0L9 805 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 PTPN22Q9Y2R2 807 aa13.67□□□□□ -0.22
MRPL55-227ENST00000475832 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 WDR64B1ANS9 1081 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 PEX10O60683 326 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 RPN1P04843 607 aaKnown RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 KRT18P05783 430 aaKnown RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 ICAM3P32942 547 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 PSMC4P43686 418 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 SARSP49591 514 aaKnown RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 STIM1Q13586 685 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 NAALADL2Q58DX5 795 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 PLEKHH3Q7Z736 793 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 CATSPER3Q86XQ3 398 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 SPATA20Q8TB22 786 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 C7orf25Q9BPX7 421 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 BPIFA3Q9BQP9 254 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 UNC45AQ9H3U1 944 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
MRPL55-227ENST00000475832 COL11A1P12107 1806 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-227ENST00000475832 NFASCO94856 1347 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 ZSWIM8A7E2V4 1837 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 POTEB3A0JP26 581 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 SPATA31C2B4DYI2 1134 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 MED24O75448 989 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 PGK2P07205 417 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 P4HBP07237 508 aaKnown RBP13.65□□□□□ -0.22
MRPL55-227ENST00000475832 PLA2G4BP0C869 781 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 TGFB3P10600 412 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 EDNRBP24530 442 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 DEKP35659 375 aaKnown RBP13.65□□□□□ -0.22
MRPL55-227ENST00000475832 PPP1R2P41236 205 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 PRMT2P55345 433 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 ASIC1P78348 528 aa13.65□□□□□ -0.22
MRPL55-227ENST00000475832 CUL4BQ13620 913 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms