RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SFR1Q86XK3 245 aa15.58■□□□□ 0.08
UBXN11-214ENST00000475591 FUT8Q9BYC5 575 aa15.58■□□□□ 0.08
UBXN11-214ENST00000475591 ZNF70Q9UC06 446 aaPredicted RBP15.58■□□□□ 0.08
UBXN11-214ENST00000475591 UTRNP46939 3433 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 CNTNAP1P78357 1384 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 RPA1P27694 616 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 POLD1P28340 1107 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 VSNL1P62760 191 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 SPA17Q15506 151 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 PDXDC1Q6P996 788 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 ZNF662Q6ZS27 426 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 CACNA2D4Q7Z3S7 1137 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 MSANTD4Q8NCY6 345 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 DRC1Q96MC2 740 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 PURBQ96QR8 312 aaKnown RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 WDR18Q9BV38 432 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 LSM14BQ9BX40 385 aaKnown RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 GLIS2Q9BZE0 524 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 TMEM39BQ9GZU3 492 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 DEF6Q9H4E7 631 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 PRDM4Q9UKN5 801 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 DNM3Q9UQ16 869 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 SAR1BQ9Y6B6 198 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 CAPN6Q9Y6Q1 641 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 CHMP2AO43633 222 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 FOSP01100 380 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 MYBP10242 640 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 HOXD13P35453 343 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 GABPB1Q06547 395 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 KIF5AQ12840 1032 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 RUSC1Q9BVN2 902 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 BHMT2Q9H2M3 363 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 TMOD2Q9NZR1 351 aa15.57■□□□□ 0.08
UBXN11-214ENST00000475591 ZHX1Q9UKY1 873 aaPredicted RBP15.57■□□□□ 0.08
UBXN11-214ENST00000475591 IGLV3-22A0A075B6J6 115 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 CCDC151A5D8V7 595 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ZBTB39O15060 712 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 TBX3O15119 743 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 AKR1B10O60218 316 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 RXRBP28702 533 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 GFPT1Q06210 699 aaPredicted RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ADAM9Q13443 819 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 TERF2Q15554 542 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 TRIM59Q8IWR1 403 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ANKRD13CQ8N6S4 541 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 SYT2Q8N9I0 419 aaPredicted RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ERMNQ8TAM6 284 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 PIGOQ8TEQ8 1089 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 EIF2AK1Q9BQI3 630 aaKnown RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ARHGEF10LQ9HCE6 1279 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 FBXO28Q9NVF7 368 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ZBTB21Q9ULJ3 1066 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 SFI1A8K8P3 1242 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 POLR3GO15318 223 aaPredicted RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 TLR2O60603 784 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 PRPF6O94906 941 aaKnown RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 MOCS3O95396 460 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 CIITAP33076 1130 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 CTTNQ14247 550 aaKnown RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 DLGAP5Q15398 846 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 HGSNATQ68CP4 663 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 SUPT20HQ8NEM7 779 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 SECISBP2LQ93073 1101 aaKnown RBP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 FAM20AQ96MK3 541 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 IKZF4Q9H2S9 585 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 ABCB6Q9NP58 842 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 SALL4Q9UJQ4 1053 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 TMX2Q9Y320 296 aa15.56■□□□□ 0.08
UBXN11-214ENST00000475591 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.56■□□□□ 0.08
UBXN11-214ENST00000475591 PITPNM2Q9BZ72 1349 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 PDE2AO00408 941 aaPredicted RBP15.55■□□□□ 0.08
UBXN11-214ENST00000475591 NR2F2P24468 414 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 POLR2FP61218 127 aaKnown RBP15.55■□□□□ 0.08
UBXN11-214ENST00000475591 KCNA1Q09470 495 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 BRD3Q15059 726 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 FOXR2Q6PJQ5 311 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 CEP63Q96MT8 703 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 ZCCHC17Q9NP64 241 aaKnown RBP15.55■□□□□ 0.08
UBXN11-214ENST00000475591 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 TDRD12Q587J7 1177 aaKnown RBP15.55■□□□□ 0.08
UBXN11-214ENST00000475591 BEND6Q5SZJ8 279 aaPredicted RBP15.55■□□□□ 0.08
UBXN11-214ENST00000475591 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
UBXN11-214ENST00000475591 FAM151AQ8WW52 585 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 IQCDQ96DY2 449 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 GMLQ99445 158 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 SH2D4AQ9H788 454 aa15.55■□□□□ 0.08
UBXN11-214ENST00000475591 COL2A1P02458 1487 aaPredicted RBP15.54■□□□□ 0.08
UBXN11-214ENST00000475591 ARID5AQ03989 594 aa15.54■□□□□ 0.08
UBXN11-214ENST00000475591 ENOX2Q16206 610 aaKnown RBP15.54■□□□□ 0.08
UBXN11-214ENST00000475591 ASTE1Q2TB18 679 aaPredicted RBP15.54■□□□□ 0.08
UBXN11-214ENST00000475591 EHBP1Q8NDI1 1231 aa15.54■□□□□ 0.08
UBXN11-214ENST00000475591 JADE2Q9NQC1 790 aa15.54■□□□□ 0.08
UBXN11-214ENST00000475591 PIK3CDO00329 1044 aa15.54■□□□□ 0.08
UBXN11-214ENST00000475591 CYP3A4P08684 503 aa15.54■□□□□ 0.08
UBXN11-214ENST00000475591 ACTN1P12814 892 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms