RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ZNF34Q8IZ26 560 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 CALML4Q96GE6 196 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 MMTAG2Q9BU76 263 aaKnown RBP19.44■□□□□ 0.7
CCM2-207ENST00000475551 NEUROG2Q9H2A3 272 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 KCNK3O14649 394 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 OPLAHO14841 1288 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 ATP6V1G2O95670 118 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 USP11P51784 963 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 MAGOHP61326 146 aaKnown RBP19.43■□□□□ 0.7
CCM2-207ENST00000475551 MSL1Q68DK7 614 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 UBLCP1Q8WVY7 318 aaPredicted RBP19.43■□□□□ 0.7
CCM2-207ENST00000475551 MAGOHBQ96A72 148 aaKnown RBP19.43■□□□□ 0.7
CCM2-207ENST00000475551 RIC8AQ9NPQ8 531 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 KIF4AO95239 1232 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 IBSPP21815 317 aaPredicted RBP19.43■□□□□ 0.7
CCM2-207ENST00000475551 GNAQP50148 359 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 DDX42Q86XP3 938 aaKnown RBP eCLIP19.43■□□□□ 0.7
CCM2-207ENST00000475551 PROM2Q8N271 834 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 HOOK2Q96ED9 719 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 TANGO6Q9C0B7 1094 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 BARHL2Q9NY43 387 aa19.43■□□□□ 0.7
CCM2-207ENST00000475551 CCT8L1PA6NM43 557 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 PHF20L1A8MW92 1017 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 F8W031 263 aaPredicted RBP19.42■□□□□ 0.7
CCM2-207ENST00000475551 SART1O43290 800 aaKnown RBP19.42■□□□□ 0.7
CCM2-207ENST00000475551 GSTA1P08263 222 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 MAB21L3Q8N8X9 362 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 CHMP6Q96FZ7 201 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 TSG101Q99816 390 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 NOD2Q9HC29 1040 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 A0A087X0T9 212 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 MYMKA6NI61 221 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 CCDC188H7C350 402 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 STXBP3O00186 592 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 FAM228BP0C875 321 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 PAX7P23759 505 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 IGHMBP2P38935 993 aaKnown RBP19.42■□□□□ 0.7
CCM2-207ENST00000475551 ERMARDQ5T6L9 678 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 CRELD2Q6UXH1 353 aaPredicted RBP19.42■□□□□ 0.7
CCM2-207ENST00000475551 CUL5Q93034 780 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 TLCD1Q96CP7 247 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 PSMD1Q99460 953 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 STK17AQ9UEE5 414 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
CCM2-207ENST00000475551 TSPY2A6NKD2 308 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 C10orf76Q5T2E6 689 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 TMC3Q7Z5M5 1100 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 PACSIN1Q9BY11 444 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 TRIM6Q9C030 488 aaPredicted RBP19.41■□□□□ 0.7
CCM2-207ENST00000475551 BLOC1S4Q9NUP1 217 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 AIPL1Q9NZN9 384 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 NUP98P52948 1817 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 BACH1O14867 736 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 ATP2C2O75185 946 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 GBP2P32456 591 aaPredicted RBP19.41■□□□□ 0.7
CCM2-207ENST00000475551 FLT3P36888 993 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 TECP42680 631 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 KCNQ4P56696 695 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 POLR2FP61218 127 aaKnown RBP19.41■□□□□ 0.7
CCM2-207ENST00000475551 EVX2Q03828 476 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 RIPK1Q13546 671 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 GRM4Q14833 912 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 SPDYCQ5MJ68 293 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 CCDC197Q8NCU1 140 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 SEC14L1Q92503 715 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 RSRC1Q96IZ7 334 aaKnown RBP19.41■□□□□ 0.7
CCM2-207ENST00000475551 XPO6Q96QU8 1125 aaKnown RBP19.41■□□□□ 0.7
CCM2-207ENST00000475551 LSM14BQ9BX40 385 aaKnown RBP19.41■□□□□ 0.7
CCM2-207ENST00000475551 EBF2Q9HAK2 575 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 COL4A3BPQ9Y5P4 624 aa19.41■□□□□ 0.7
CCM2-207ENST00000475551 A0A1B0GUL6 1792 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 LOC102724428A0A0B4J2F2 783 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 DCDC2CA8MYV0 355 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 PGRMC1O00264 195 aaKnown RBP19.4■□□□□ 0.7
CCM2-207ENST00000475551 CEP104O60308 925 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 CCNT1O60563 726 aaKnown RBP19.4■□□□□ 0.7
CCM2-207ENST00000475551 SIK1P57059 783 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 CHRNDQ07001 517 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 PSMD2Q13200 908 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 KRT25Q7Z3Z0 450 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 DGKHQ86XP1 1220 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCM2-207ENST00000475551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCM2-207ENST00000475551 FAM129AQ9BZQ8 928 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 F8VZ95 297 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 NEBLO76041 1014 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 CYP19A1P11511 503 aaPredicted RBP19.4■□□□□ 0.7
CCM2-207ENST00000475551 EIF3BP55884 814 aaKnown RBP19.4■□□□□ 0.7
CCM2-207ENST00000475551 PPARDQ03181 441 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 KLHL30Q0D2K2 578 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 GRB10Q13322 594 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 IFI16Q16666 785 aaKnown RBP19.4■□□□□ 0.7
CCM2-207ENST00000475551 KRT71Q3SY84 523 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 LRCH2Q5VUJ6 765 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 HIBCHQ6NVY1 386 aaPredicted RBP19.4■□□□□ 0.7
CCM2-207ENST00000475551 HEATR3Q7Z4Q2 680 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 SLITRK6Q9H5Y7 841 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCM2-207ENST00000475551 ADAMTS1Q9UHI8 967 aa19.4■□□□□ 0.7
CCM2-207ENST00000475551 ZBTB48P10074 688 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms