RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PCDHA6Q9UN73 950 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 PCDHA8Q9Y5H6 950 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 TNFRSF10AO00220 468 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 CTSHP09668 335 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 CALM1P0DP23 149 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 CALM2P0DP24 149 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 CALM3P0DP25 149 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 TCF7P36402 384 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-207ENST00000475549 ERVK-21P61565 698 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 HTRA4P83105 476 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-207ENST00000475549 FAM26DQ5JW98 314 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 APOA5Q6Q788 366 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
HDAC3-207ENST00000475549 MICU3Q86XE3 530 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 CUL5Q93034 780 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 GPRASP2Q96D09 838 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 C17orf80Q9BSJ5 609 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 JADE2Q9NQC1 790 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 PKD2L1Q9P0L9 805 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 MTUS1Q9ULD2 1270 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-207ENST00000475549 SCN5AQ14524 2016 aa8.07□□□□□ -1.12
HDAC3-207ENST00000475549 TET1Q8NFU7 2136 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 EMSYQ7Z589 1322 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 BDP1A6H8Y1 2624 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 MBLAC1A4D2B0 266 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-207ENST00000475549 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 ARP10275 920 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 CPA1P15085 419 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 CDC27P30260 824 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 ARHGAP4P98171 946 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 ITGB3BPQ13352 177 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-207ENST00000475549 MTMR1Q13613 665 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 CENPQQ7L2Z9 268 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-207ENST00000475549 HEATR3Q7Z4Q2 680 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 NLRX1Q86UT6 975 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 SP7Q8TDD2 431 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-207ENST00000475549 GDPD5Q8WTR4 605 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 SEPT1Q8WYJ6 367 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 KCNB2Q92953 911 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 TOP1MTQ969P6 601 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 PGBD1Q96JS3 809 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 EHMT1Q9H9B1 1298 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 KCNH7Q9NS40 1196 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
HDAC3-207ENST00000475549 CNTNAP5Q8WYK1 1306 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 NRCAMQ92823 1304 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 STXBP3O00186 592 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 MEIS1O00470 390 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 MAFGO15525 162 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 EFCAB14O75071 495 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 CAND2O75155 1236 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 AMHP03971 560 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 GNAT1P11488 350 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 MARK3P27448 753 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 ADD1P35611 737 aaKnown RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 CLK2P49760 499 aaKnown RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 MGAT3Q09327 533 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 LPIN1Q14693 890 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 RPAINQ86UA6 219 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 RTN4RL1Q86UN2 441 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 MYOCDQ8IZQ8 938 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 CRIPAKQ8N1N5 446 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 GIMAP8Q8ND71 665 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 CRYGNQ8WXF5 182 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 SEPT8Q92599 483 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 TGS1Q96RS0 853 aaKnown RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 UHRF1Q96T88 793 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 MXRA8Q9BRK3 442 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 RIC8AQ9NPQ8 531 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 INSL6Q9Y581 213 aa8.05□□□□□ -1.12
HDAC3-207ENST00000475549 BAZ2BQ9UIF8 2168 aaKnown RBP8.05□□□□□ -1.12
HDAC3-207ENST00000475549 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 SPDYE3A6NKU9 549 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 FAM86B1E9PN63 330 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ENPP3O14638 875 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 DHX15O43143 795 aaKnown RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ZBTB43O43298 467 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 EDIL3O43854 480 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 UPP2O95045 317 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ATG7O95352 703 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 CCNE2O96020 404 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 GHRP10912 638 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 INSRRP14616 1297 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ACTR2P61160 394 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 PPFIA1Q13136 1202 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 GRIK4Q16099 956 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 PKN1Q16512 942 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 RTN1Q16799 776 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 EPC2Q52LR7 807 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 CEP55Q53EZ4 464 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 DNAJB3Q8WWF6 145 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 GLG1Q92896 1179 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 HLA-CQ95604 372 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms