RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 FAM161BQ96MY7 647 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 CDX2Q99626 313 aaPredicted RBP17.8■□□□□ 0.44
CPSF3-203ENST00000475482 ALG1Q9BT22 464 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 MTIF3Q9H2K0 278 aaKnown RBP17.8■□□□□ 0.44
CPSF3-203ENST00000475482 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
CPSF3-203ENST00000475482 NOD1Q9Y239 953 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 KAT6AQ92794 2004 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 CHD9Q3L8U1 2897 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 GRXCR1A8MXD5 290 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 H3BRB1 525 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 MAFGO15525 162 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 JAK2O60674 1132 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 ATP9AO75110 1047 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 CTDNEP1O95476 244 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
CPSF3-203ENST00000475482 NAPAP54920 295 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 CHMP4BP1P59074 171 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
CPSF3-203ENST00000475482 PTK7Q13308 1070 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 NTRK3Q16288 839 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 PFKFB3Q16875 520 aaPredicted RBP17.79■□□□□ 0.44
CPSF3-203ENST00000475482 TRAF7Q6Q0C0 670 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 GIMAP8Q8ND71 665 aaPredicted RBP17.79■□□□□ 0.44
CPSF3-203ENST00000475482 CDHR1Q96JP9 859 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 TUT1Q9H6E5 874 aaKnown RBP17.79■□□□□ 0.44
CPSF3-203ENST00000475482 JADE2Q9NQC1 790 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 TELO2Q9Y4R8 837 aa17.79■□□□□ 0.44
CPSF3-203ENST00000475482 GOLGA6L22H0YM25 854 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 PARNO95453 639 aaKnown RBP17.78■□□□□ 0.44
CPSF3-203ENST00000475482 FOSP01100 380 aaPredicted RBP17.78■□□□□ 0.44
CPSF3-203ENST00000475482 SELPP16109 830 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 PTMSP20962 102 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 PBX2P40425 430 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 PKN1Q16512 942 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 TNPO1Q92973 898 aaKnown RBP17.78■□□□□ 0.44
CPSF3-203ENST00000475482 WNT8BQ93098 351 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 TIFAQ96CG3 184 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 GLT8D2Q9H1C3 349 aa17.78■□□□□ 0.44
CPSF3-203ENST00000475482 ESYT2A0FGR8 921 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 VPS37CA5D8V6 355 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-203ENST00000475482 SMCO2A6NFE2 343 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 NOP56O00567 594 aaKnown RBP17.77■□□□□ 0.44
CPSF3-203ENST00000475482 PRPF3O43395 683 aaKnown RBP17.77■□□□□ 0.44
CPSF3-203ENST00000475482 CXCL10P02778 98 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 CKBP12277 381 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 ZNF200P98182 395 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-203ENST00000475482 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 TRIM29Q14134 588 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 CLEC17AQ6ZS10 378 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 SERINC5Q86VE9 423 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 CRYGNQ8WXF5 182 aa17.77■□□□□ 0.44
CPSF3-203ENST00000475482 RNF26Q9BY78 433 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-203ENST00000475482 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 DEXIO95424 95 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 SCG2P13521 617 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 XBP1P17861 261 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 ADCY7P51828 1080 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 ADAM17P78536 824 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 MTMR1Q13613 665 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 RAB30Q15771 203 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 LRRC8DQ7L1W4 858 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 MXRA8Q9BRK3 442 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 ZMYND12Q9H0C1 365 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 RNPEPQ9H4A4 650 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 ZNF576Q9H609 170 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 EHMT1Q9H9B1 1298 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 SLC4A7Q9Y6M7 1214 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 CHD7Q9P2D1 2997 aa17.76■□□□□ 0.43
CPSF3-203ENST00000475482 GSTTP1A0A1W2PQM5 241 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 NBNO60934 754 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 F13A1P00488 732 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 SMIM10L2AP0DMW4 78 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 SMIM10L2BP0DMW5 78 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 SREBF1P36956 1147 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 PKP1Q13835 747 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 ZSCAN16Q9H4T2 348 aaPredicted RBP17.75■□□□□ 0.43
CPSF3-203ENST00000475482 KCNH7Q9NS40 1196 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 YBX2Q9Y2T7 364 aaKnown RBP17.75■□□□□ 0.43
CPSF3-203ENST00000475482 EYSQ5T1H1 3165 aa17.75■□□□□ 0.43
CPSF3-203ENST00000475482 A0A0C4DFX4 3053 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 C17orf102A2RUQ5 167 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 MEIS1O00470 390 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 ACTN1P12814 892 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 MBTPS1Q14703 1052 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 TRIM50Q86XT4 487 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 PHOSPHO2Q8TCD6 241 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 MYLIPQ8WY64 445 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 SEPT1Q8WYJ6 367 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms