RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 CLP1Q92989 425 aaKnown RBP18.43■□□□□ 0.54
ITGB1-211ENST00000475184 RC3H2Q9HBD1 1191 aaKnown RBP18.43■□□□□ 0.54
ITGB1-211ENST00000475184 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
ITGB1-211ENST00000475184 STXBP3O00186 592 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 CSPG5O95196 566 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 SDSP20132 328 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 GTF2F1P35269 517 aaKnown RBP eCLIP18.42■□□□□ 0.541e-12■■■■■ 49.4
ITGB1-211ENST00000475184 ADAM17P78536 824 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 ARHGAP4P98171 946 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 NEDD9Q14511 834 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 IFIT1BQ5T764 474 aaKnown RBP18.42■□□□□ 0.54
ITGB1-211ENST00000475184 CYFIP1Q7L576 1253 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 EDAQ92838 391 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 GPR20Q99678 358 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 IGFLR1Q9H665 355 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 CD207Q9UJ71 328 aa18.42■□□□□ 0.54
ITGB1-211ENST00000475184 LINC01565O15544 149 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 CHRNA1P02708 482 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 MMP1P03956 469 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 GHRP10912 638 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 ICAM3P32942 547 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 TRAF1Q13077 416 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 HOMER1Q86YM7 354 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 SNX27Q96L92 541 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 INPP4AQ96PE3 977 aaPredicted RBP18.41■□□□□ 0.54
ITGB1-211ENST00000475184 PHOX2BQ99453 314 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 KRT23Q9C075 422 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 PTPRZ1P23471 2315 aaPredicted RBP18.41■□□□□ 0.54
ITGB1-211ENST00000475184 PLXNA4Q9HCM2 1894 aa18.41■□□□□ 0.54
ITGB1-211ENST00000475184 STAM2O75886 525 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
ITGB1-211ENST00000475184 SEMA3FQ13275 785 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 BTG3Q14201 252 aaPredicted RBP18.4■□□□□ 0.54
ITGB1-211ENST00000475184 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
ITGB1-211ENST00000475184 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
ITGB1-211ENST00000475184 BMP8AQ7Z5Y6 402 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 PRSS33Q8NF86 280 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 PLVAPQ9BX97 442 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 ALG13Q9NP73 1137 aaKnown RBP18.4■□□□□ 0.54
ITGB1-211ENST00000475184 FRMPD4Q14CM0 1322 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 NRCAMQ92823 1304 aa18.4■□□□□ 0.54
ITGB1-211ENST00000475184 RIF1Q5UIP0 2472 aaKnown RBP18.39■□□□□ 0.53
ITGB1-211ENST00000475184 PALM3A6NDB9 673 aaPredicted RBP18.39■□□□□ 0.53
ITGB1-211ENST00000475184 SPATA31C2B4DYI2 1134 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 FIBPO43427 364 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 NDUFV1P49821 464 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 ADAM15Q13444 863 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 LPIN1Q14693 890 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 SEC23AQ15436 765 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
ITGB1-211ENST00000475184 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 PPP2R3CQ969Q6 453 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 ZNF689Q96CS4 500 aaPredicted RBP18.39■□□□□ 0.53
ITGB1-211ENST00000475184 MSLNLQ96KJ4 702 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 PIGSQ96S52 555 aa18.39■□□□□ 0.53
ITGB1-211ENST00000475184 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
ITGB1-211ENST00000475184 TMEM221A6NGB7 291 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 M0R296 226 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 ENPP3O14638 875 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 PTPN5P54829 565 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 SP4Q02446 784 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
ITGB1-211ENST00000475184 CAMK1Q14012 370 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 RUFY4Q6ZNE9 571 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 TRIM67Q6ZTA4 783 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 PBXIP1Q96AQ6 731 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 DSCC1Q9BVC3 393 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 LNPKQ9C0E8 428 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 RTEL1Q9NZ71 1219 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 PLAGL2Q9UPG8 496 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 TELO2Q9Y4R8 837 aa18.38■□□□□ 0.53
ITGB1-211ENST00000475184 DGKIO75912 1065 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 EYA4O95677 639 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 MGAT3Q09327 533 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 IER5LQ5T953 404 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 SMRP1Q8NCR6 262 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 P2RX5Q93086 422 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 RIOX1Q9H6W3 641 aa18.37■□□□□ 0.53
ITGB1-211ENST00000475184 GRM4Q14833 912 aa18.36■□□□□ 0.53
ITGB1-211ENST00000475184 PKN1Q16512 942 aa18.36■□□□□ 0.53
ITGB1-211ENST00000475184 FNDC1Q4ZHG4 1894 aaPredicted RBP18.36■□□□□ 0.53
ITGB1-211ENST00000475184 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
ITGB1-211ENST00000475184 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
ITGB1-211ENST00000475184 PRRX2Q99811 253 aa18.36■□□□□ 0.53
ITGB1-211ENST00000475184 SENP7Q9BQF6 1050 aa18.36■□□□□ 0.53
ITGB1-211ENST00000475184 MRPL42Q9Y6G3 142 aaKnown RBP18.36■□□□□ 0.53
ITGB1-211ENST00000475184 FAM186AA6NE01 2351 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 PNMA6FA0A0J9YX94 578 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 CYTH3O43739 400 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 ITGB1P05556 798 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 DNAJB1P25685 340 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 CYB5R4Q7L1T6 521 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms