RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FRMPD4Q14CM0 1322 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 CSPG5O95196 566 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 CYP21A2P08686 494 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 ICAM3P32942 547 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 SEMA3FQ13275 785 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 CSPP1Q1MSJ5 1256 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 PUS10Q3MIT2 529 aaKnown RBP16.15■□□□□ 0.18
CCDC78-209ENST00000474647 NEK9Q8TD19 979 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 CUL5Q93034 780 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 INPP4AQ96PE3 977 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-209ENST00000474647 NSUN3Q9H649 340 aaKnown RBP16.15■□□□□ 0.18
CCDC78-209ENST00000474647 CLDND1Q9NY35 253 aa16.15■□□□□ 0.18
CCDC78-209ENST00000474647 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-209ENST00000474647 PRR33A8MZF0 331 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 SPATA31C2B4DYI2 1134 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 GHRP10912 638 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 CATIPQ7Z7H3 387 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 FIBCD1Q8N539 461 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 NCOA7Q8NI08 942 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
CCDC78-209ENST00000474647 PABPC5Q96DU9 382 aaKnown RBP16.14■□□□□ 0.17
CCDC78-209ENST00000474647 ALADP13716 330 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 PTH1RQ03431 593 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 TROAPQ12815 778 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 USP17L6PQ6QN14 398 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 IL17RAQ96F46 866 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 MYL10Q9BUA6 226 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 FAM50BQ9Y247 325 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 ADGRA3Q8IWK6 1321 aa16.13■□□□□ 0.17
CCDC78-209ENST00000474647 E7EWF7 191 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 GSPT1P15170 499 aaKnown RBP16.12■□□□□ 0.17
CCDC78-209ENST00000474647 MARK3P27448 753 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 TCF7P36402 384 aaPredicted RBP16.12■□□□□ 0.17
CCDC78-209ENST00000474647 CLUL1Q15846 466 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 FAM26DQ5JW98 314 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 PCNX4Q63HM2 1172 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 RUFY4Q6ZNE9 571 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 RPAINQ86UA6 219 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 RUFY2Q8WXA3 655 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 RRP36Q96EU6 259 aaKnown RBP16.12■□□□□ 0.17
CCDC78-209ENST00000474647 SEC63Q9UGP8 760 aaKnown RBP16.12■□□□□ 0.17
CCDC78-209ENST00000474647 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
CCDC78-209ENST00000474647 CHRNA1P02708 482 aa16.11■□□□□ 0.17
CCDC78-209ENST00000474647 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
CCDC78-209ENST00000474647 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
CCDC78-209ENST00000474647 CTCFLQ8NI51 663 aaPredicted RBP16.11■□□□□ 0.17
CCDC78-209ENST00000474647 C11orf84Q9BUA3 381 aaPredicted RBP16.11■□□□□ 0.17
CCDC78-209ENST00000474647 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
CCDC78-209ENST00000474647 TUBE1Q9UJT0 475 aa16.11■□□□□ 0.17
CCDC78-209ENST00000474647 ZNF318Q5VUA4 2279 aa16.11■□□□□ 0.17
CCDC78-209ENST00000474647 DCXO43602 365 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 IGBP1P78318 339 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 ADAM17P78536 824 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 ZP2Q05996 745 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 RSPH3Q86UC2 560 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 ZNF654Q8IZM8 581 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-209ENST00000474647 SENP7Q9BQF6 1050 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 RWDD3Q9Y3V2 267 aa16.1■□□□□ 0.17
CCDC78-209ENST00000474647 MEIS2O14770 477 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 GRM6O15303 877 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 PDE4AP27815 886 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 KIF5BP33176 963 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 ANTXR2P58335 489 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 BTG3Q14201 252 aaPredicted RBP16.09■□□□□ 0.17
CCDC78-209ENST00000474647 LPIN1Q14693 890 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 GRIK4Q16099 956 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 TAF2Q6P1X5 1199 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 DNAJB3Q8WWF6 145 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 GLG1Q92896 1179 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 SPZ1Q9BXG8 430 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 IGFLR1Q9H665 355 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 PRKAG3Q9UGI9 489 aa16.09■□□□□ 0.17
CCDC78-209ENST00000474647 KMT2EQ8IZD2 1858 aa16.08■□□□□ 0.17
CCDC78-209ENST00000474647 C5orf67F2Z3F1 127 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 ATP9AO75110 1047 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 DDAH1O94760 285 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 RB1P06400 928 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 CHMLP26374 656 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 BMPR1AP36894 532 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 MGAT3Q09327 533 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 CASC1Q6TDU7 716 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 ALYREFQ86V81 257 aaKnown RBP16.08■□□□□ 0.16
CCDC78-209ENST00000474647 ADHFE1Q8IWW8 467 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 MB21D2Q8IYB1 491 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-209ENST00000474647 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 GPRASP2Q96D09 838 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 LMAN2LQ9H0V9 348 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 RC3H2Q9HBD1 1191 aaKnown RBP16.08■□□□□ 0.16
CCDC78-209ENST00000474647 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.16
CCDC78-209ENST00000474647 NCK2O43639 380 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 LINC00271P0C7V0 271 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms