RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 BLIDQ8IZY5 108 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 CCDC155Q8N6L0 562 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 CRYGNQ8WXF5 182 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 GLG1Q92896 1179 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 GTF3C6Q969F1 213 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 RNPEPQ9H4A4 650 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 DOCK5Q9H7D0 1870 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 IGLV3-22A0A075B6J6 115 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 ZBBXA8MT70 800 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 JAK2O60674 1132 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 IQCF3P0C7M6 154 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 ACTR2P61160 394 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
ITGB1-210ENST00000474568 TBCKQ8TEA7 893 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 ATP6V0A1Q93050 837 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 VWCEQ96DN2 955 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 FTOQ9C0B1 505 aaKnown RBP eCLIP18.2■□□□□ 0.5
ITGB1-210ENST00000474568 CXXC1Q9P0U4 656 aaPredicted RBP18.2■□□□□ 0.5
ITGB1-210ENST00000474568 NFASCO94856 1347 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 STK36Q9NRP7 1315 aa18.2■□□□□ 0.5
ITGB1-210ENST00000474568 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 GRXCR1A8MXD5 290 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 TREHO43280 583 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 SELPP16109 830 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 PTK7Q13308 1070 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 NPY5RQ15761 445 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 NIPA1Q7RTP0 329 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
ITGB1-210ENST00000474568 CAGE1Q8TC20 777 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 FAM161BQ96MY7 647 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 PCYT2Q99447 389 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
ITGB1-210ENST00000474568 EDIL3O43854 480 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 CCNE2O96020 404 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 CKBP12277 381 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 FDPSP14324 419 aaKnown RBP18.18■□□□□ 0.5
ITGB1-210ENST00000474568 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 TRIM71Q2Q1W2 868 aaKnown RBP18.18■□□□□ 0.5
ITGB1-210ENST00000474568 LRRC8DQ7L1W4 858 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 DEFB123Q8N688 67 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 NSUN7Q8NE18 718 aaKnown RBP18.18■□□□□ 0.5
ITGB1-210ENST00000474568 AFAP1L1Q8TED9 768 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 HERVK_113Q902F9 699 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 KIF2CQ99661 725 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 AZI2Q9H6S1 392 aa18.18■□□□□ 0.5
ITGB1-210ENST00000474568 IPO5O00410 1097 aaKnown RBP18.17■□□□□ 0.5
ITGB1-210ENST00000474568 TDP2O95551 362 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 CTSHP09668 335 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 XBP1P17861 261 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 THPOP40225 353 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 IGBP1P78318 339 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 SETQ01105 290 aaPredicted RBP18.17■□□□□ 0.5
ITGB1-210ENST00000474568 PPFIA1Q13136 1202 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 ZNF618Q5T7W0 954 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 SERINC5Q86VE9 423 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 CCDC83Q8IWF9 413 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 DAGLBQ8NCG7 672 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 OXER1Q8TDS5 423 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 LMBR1Q8WVP7 490 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 GJA10Q969M2 543 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 ZBTB10Q96DT7 871 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 PHF20Q9BVI0 1012 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 SMARCAD1Q9H4L7 1026 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 ERAP1Q9NZ08 941 aa18.17■□□□□ 0.5
ITGB1-210ENST00000474568 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-210ENST00000474568 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-210ENST00000474568 M0R2N6 131 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 BACH1O14867 736 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 DHX15O43143 795 aaKnown RBP18.16■□□□□ 0.5
ITGB1-210ENST00000474568 LGR5O75473 907 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 GNAT1P11488 350 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 CIITAP33076 1130 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 SMAD3P84022 425 aaKnown RBP18.16■□□□□ 0.5
ITGB1-210ENST00000474568 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.51e-8■■■□□ 16.8
ITGB1-210ENST00000474568 INF2Q27J81 1249 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 WASF1Q92558 559 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 LENG9Q96B70 501 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 MTIF3Q9H2K0 278 aaKnown RBP18.16■□□□□ 0.5
ITGB1-210ENST00000474568 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 TRPC6Q9Y210 931 aa18.16■□□□□ 0.5
ITGB1-210ENST00000474568 MSH4O15457 936 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 HOXC8P31273 242 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 RFC2P35250 354 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 STAT5BP51692 787 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 RBL2Q08999 1139 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 GPNMBQ14956 572 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 GRIK4Q16099 956 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 RASIP1Q5U651 963 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 GALNT17Q6IS24 598 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 TRAF7Q6Q0C0 670 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 RUFY4Q6ZNE9 571 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 KRT25Q7Z3Z0 450 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 TCEAL9Q9UHQ7 104 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 EMSYQ7Z589 1322 aa18.15■□□□□ 0.5
ITGB1-210ENST00000474568 CCDC194A0A1B0GVG4 234 aa18.14■□□□□ 0.49
ITGB1-210ENST00000474568 NBNO60934 754 aa18.14■□□□□ 0.49
ITGB1-210ENST00000474568 PFKMP08237 780 aa18.14■□□□□ 0.49
ITGB1-210ENST00000474568 PBX2P40425 430 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms