RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 GPTP24298 496 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 MCM3P25205 808 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CRKP46108 304 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 AP3M2P53677 418 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 YBEYP58557 167 aaPredicted RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 APOBRQ0VD83 1088 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 PRKG1Q13976 671 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TRIM14Q14142 442 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 BECN1Q14457 450 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 C21orf62-AS1Q17RA5 79 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 FBXO43Q4G163 708 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 PPP2R2DQ66LE6 453 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TWF2Q6IBS0 349 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 ALKBH5Q6P6C2 394 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 B4GALNT4Q76KP1 1039 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 MRPL10Q7Z7H8 261 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 SYCP3Q8IZU3 236 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 SPARTQ8N0X7 666 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 SUPT20HQ8NEM7 779 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CHCHD6Q9BRQ6 235 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 SH2B1Q9NRF2 756 aaPredicted RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 ZRANB1Q9UGI0 708 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 HMGXB4Q9UGU5 601 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 DPP7Q9UHL4 492 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 USP20Q9Y2K6 914 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CD2APQ9Y5K6 639 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CARMIL1Q5VZK9 1371 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ABHD14A-ACY1A0A1B0GW23 586 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 GOLGA6L4A6NEF3 574 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 AREL1O15033 823 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 RIPK2O43353 540 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SIN3BO75182 1162 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ERLIN2O94905 339 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 YEATS4O95619 227 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SERPINC1P01008 464 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 GLI1P08151 1106 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CYP3A4P08684 503 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 POTEJP0CG39 1038 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TFEBP19484 476 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CNGA1P29973 690 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 GSTO1P78417 241 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TBX2Q13207 712 aaPredicted RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 NAA25Q14CX7 972 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 RBM20Q5T481 1227 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 CYB5RLQ6IPT4 315 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 HHIPL2Q6UWX4 724 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CAPN12Q6ZSI9 719 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ZNF598Q86UK7 904 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 PALB2Q86YC2 1186 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ZNF454Q8N9F8 522 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ANKRD53Q8N9V6 530 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 KCNH5Q8NCM2 988 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 PLBD2Q8NHP8 589 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 DEPTORQ8TB45 409 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 BSNDQ8WZ55 320 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 PPM1MQ96MI6 270 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 LLPHQ9BRT6 129 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 GLRX2Q9NS18 164 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ATAD3AQ9NVI7 634 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 NKIRAS2Q9NYR9 191 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 FETUBQ9UGM5 382 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TEKT2Q9UIF3 430 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 PNMA3Q9UL41 463 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 PHTF1Q9UMS5 762 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ZKSCAN5Q9Y2L8 839 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.82□□□□□ -1.8
UBR3-208ENST00000474426 CLRN2A0PK11 232 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TARSL2A2RTX5 802 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 UBXN8O00124 270 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 E2F3O00716 465 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 EXTL3O43909 919 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 FGF18O76093 207 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 DDHD2O94830 711 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 OR5F1O95221 314 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 GOSR1O95249 250 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CTSHP09668 335 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 LTA4HP09960 611 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 AKR1B1P15121 316 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SULT1E1P49888 294 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CORO7P57737 925 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 POLR2GP62487 172 aaKnown RBP eCLIP3.82□□□□□ -1.8
UBR3-208ENST00000474426 NCBP1Q09161 790 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 SCRN1Q12765 414 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CBX3Q13185 183 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 STIM1Q13586 685 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SAFBQ15424 915 aaKnown RBP eCLIP3.82□□□□□ -1.8
UBR3-208ENST00000474426 CLUL1Q15846 466 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TMTC4Q5T4D3 741 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CLEC2AQ6UVW9 174 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TPH2Q8IWU9 490 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CD302Q8IX05 232 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SYT2Q8N9I0 419 aaPredicted RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 SLC22A8Q8TCC7 542 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 PHOSPHO2Q8TCD6 241 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 AKT1S1Q96B36 256 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 GORASP1Q9BQQ3 440 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ACAD9Q9H845 621 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 BRD9Q9H8M2 597 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 UBN1Q9NPG3 1134 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ADGRE2Q9UHX3 823 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms