RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 PSMC6P62333 389 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 SPIRE1Q08AE8 756 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 ORC2Q13416 577 aaPredicted RBP11.8□□□□□ -0.52
VANGL1-205ENST00000474344 ITGA7Q13683 1181 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 ZNF746Q6NUN9 644 aaPredicted RBP11.8□□□□□ -0.52
VANGL1-205ENST00000474344 SESTD1Q86VW0 696 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 FAM20AQ96MK3 541 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 TOX2Q96NM4 488 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 SEZ6LQ9BYH1 1024 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 TMEM60Q9H2L4 133 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 STARD7Q9NQZ5 370 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 MTMR6Q9Y217 621 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 SIP14410 1827 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 TRIOBPQ9H2D6 2365 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-205ENST00000474344 H3BQV1 296 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 CD4P01730 458 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 ZNF286BP0CG31 522 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 TCF7P36402 384 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-205ENST00000474344 RTP1P59025 263 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-205ENST00000474344 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 CTAGE1Q96RT6 745 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 HTATIP2Q9BUP3 242 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 EMSYQ7Z589 1322 aa11.79□□□□□ -0.52
VANGL1-205ENST00000474344 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 MYH11P35749 1972 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 H3BRB1 525 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 NOP56O00567 594 aaKnown RBP11.78□□□□□ -0.52
VANGL1-205ENST00000474344 STX6O43752 255 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 ATP4AP20648 1035 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 PSEN2P49810 448 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 ADAM17P78536 824 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 KRT76Q01546 638 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 SP4Q02446 784 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 TLE2Q04725 743 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 PTPN11Q06124 597 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-205ENST00000474344 RESTQ13127 1097 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 HIC1Q14526 733 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 NBR1Q14596 966 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 TRIM60Q495X7 471 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 FAM126BQ8IXS8 530 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 RNPEPQ9H4A4 650 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 TUT1Q9H6E5 874 aaKnown RBP11.78□□□□□ -0.52
VANGL1-205ENST00000474344 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.78□□□□□ -0.52
VANGL1-205ENST00000474344 PCDHB6Q9Y5E3 794 aa11.78□□□□□ -0.52
VANGL1-205ENST00000474344 DDX39AO00148 427 aaKnown RBP11.77□□□□□ -0.53
VANGL1-205ENST00000474344 EML1O00423 815 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 NEMFO60524 1076 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 GAS7O60861 476 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 MCM7P33993 719 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 FAAP100Q0VG06 881 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 MFSD10Q14728 455 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 ZNF174Q15697 407 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 KIAA0753Q2KHM9 967 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 RILPL1Q5EBL4 403 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 BRAPQ7Z569 592 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 CCDC60Q8IWA6 550 aaPredicted RBP11.77□□□□□ -0.53
VANGL1-205ENST00000474344 SMAP1Q8IYB5 467 aaPredicted RBP11.77□□□□□ -0.53
VANGL1-205ENST00000474344 SLFN12Q8IYM2 578 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 RDM1Q8NG50 284 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 PPP1R13LQ8WUF5 828 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 SMARCAD1Q9H4L7 1026 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.53
VANGL1-205ENST00000474344 MAFBQ9Y5Q3 323 aaPredicted RBP11.77□□□□□ -0.53
VANGL1-205ENST00000474344 LAMA3Q16787 3333 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
VANGL1-205ENST00000474344 WDR64B1ANS9 1081 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 ZNF862O60290 1169 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 STBD1O95210 358 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
VANGL1-205ENST00000474344 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 SFNP31947 248 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 DDIT3P35638 169 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 STAT5BP51692 787 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
VANGL1-205ENST00000474344 PKP1Q13835 747 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 CALCRLQ16602 461 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 UTP14CQ5TAP6 766 aaKnown RBP11.76□□□□□ -0.53
VANGL1-205ENST00000474344 GDF6Q6KF10 455 aaPredicted RBP11.76□□□□□ -0.53
VANGL1-205ENST00000474344 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 KATNAL1Q9BW62 490 aa11.76□□□□□ -0.53
VANGL1-205ENST00000474344 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms