RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SKIDA1Q1XH10 827 aa5.72□□□□□ -1.49
TMEM50B-208ENST00000474272 Q6ZUG5 572 aa5.72□□□□□ -1.49
TMEM50B-208ENST00000474272 KCTD13Q8WZ19 329 aa5.72□□□□□ -1.49
TMEM50B-208ENST00000474272 LRRC37BQ96QE4 947 aa5.72□□□□□ -1.49
TMEM50B-208ENST00000474272 WRNIP1Q96S55 665 aa5.72□□□□□ -1.49
TMEM50B-208ENST00000474272 ZFP69BQ9UJL9 534 aa5.72□□□□□ -1.49
TMEM50B-208ENST00000474272 BLACEA4D250 179 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 MUSKO15146 869 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 MAFKO60675 156 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 FBXO21O94952 628 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 KNG1P01042 644 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 SELENOPP49908 381 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 KLF10Q13118 480 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 SMAD2Q15796 467 aaKnown RBP5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 PAN2Q504Q3 1202 aaKnown RBP5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 TCTN3Q6NUS6 607 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 EEPD1Q7L9B9 569 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 OTOP3Q7RTS5 596 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 VPS37DQ86XT2 251 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 TRIM48Q8IWZ4 208 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 ZNF408Q9H9D4 720 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 DLL4Q9NR61 685 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 GPR27Q9NS67 375 aa5.71□□□□□ -1.5
TMEM50B-208ENST00000474272 CYR61O00622 381 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 FAHP16930 419 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 PFKPQ01813 784 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 MAP4K2Q12851 820 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 RALYLQ86SE5 291 aaKnown RBP5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 CELF2-AS1Q8N7Q2 184 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 MENTQ9BUN1 341 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 HSPBP1Q9NZL4 362 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 ARHGAP20Q9P2F6 1191 aa5.7□□□□□ -1.5
TMEM50B-208ENST00000474272 AGRPO00253 132 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 IL18BPO95998 194 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 ZNF888P0CJ79 500 aaPredicted RBP5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 CSF2RBP32927 897 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 ZC3H6P61129 1189 aaKnown RBP5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 TTLL11Q8NHH1 800 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 HNRNPLLQ8WVV9 542 aaKnown RBP5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 LMF1Q96S06 567 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 TACO1Q9BSH4 297 aaKnown RBP5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 TINF2Q9BSI4 451 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 ZNF341Q9BYN7 854 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 PCED1AQ9H1Q7 454 aa5.69□□□□□ -1.5
TMEM50B-208ENST00000474272 PRODHO43272 600 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 GNAT1P11488 350 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 NOLC1Q14978 699 aaKnown RBP eCLIP5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 NTRK3Q16288 839 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 CD276Q5ZPR3 534 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 CYP4F22Q6NT55 531 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 TAX1BP1Q86VP1 789 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 GIMAP8Q8ND71 665 aaPredicted RBP5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 KCND1Q9NSA2 647 aa5.68□□□□□ -1.5
TMEM50B-208ENST00000474272 NPIPB8E9PQR5 432 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 ACOT7O00154 380 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 ENO2P09104 434 aaPredicted RBP5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 GRK2P25098 689 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 GRK3P35626 688 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 IGFL4Q6B9Z1 124 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 USP51Q70EK9 711 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 UHMK1Q8TAS1 419 aaKnown RBP5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 AJUBAQ96IF1 538 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 ADOQ96SZ5 270 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 CD244Q9BZW8 370 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 SLC39A2Q9NP94 309 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 DSEQ9UL01 958 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 ZFR2Q9UPR6 939 aaKnown RBP5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 TESMINQ9Y4I5 508 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 SLC4A7Q9Y6M7 1214 aa5.67□□□□□ -1.5
TMEM50B-208ENST00000474272 SPIRE1Q08AE8 756 aa5.66□□□□□ -1.5
TMEM50B-208ENST00000474272 NAALADL2Q58DX5 795 aa5.66□□□□□ -1.5
TMEM50B-208ENST00000474272 YOD1Q5VVQ6 348 aaPredicted RBP5.66□□□□□ -1.5
TMEM50B-208ENST00000474272 OSBP2Q969R2 916 aa5.66□□□□□ -1.5
TMEM50B-208ENST00000474272 SEC61A2Q9H9S3 476 aa5.66□□□□□ -1.5
TMEM50B-208ENST00000474272 ESYT3A0FGR9 886 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 ZNF839A8K0R7 811 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 H0Y858 1186 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 PLSCR1O15162 318 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 SOD2P04179 222 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 FGRP09769 529 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 HSP90AA2PQ14568 343 aaPredicted RBP5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 NRN1LQ496H8 165 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 CRB2Q5IJ48 1285 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 RSPO2Q6UXX9 243 aaPredicted RBP5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 KCTD1Q719H9 257 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 MCF2L2Q86YR7 1114 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 DCAF4Q8WV16 495 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 EXTL1Q92935 676 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 NEIL1Q96FI4 390 aaPredicted RBP5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 EPN3Q9H201 632 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 IPPKQ9H8X2 491 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 ARHGEF4Q9NR80 690 aa5.65□□□□□ -1.5
TMEM50B-208ENST00000474272 ASXL2Q76L83 1435 aa5.65□□□□□ -1.51
TMEM50B-208ENST00000474272 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 TCRBV5S4A2TA0A5A2 114 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms