RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 STK3Q13188 491 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 GPNMBQ14956 572 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 TRIM71Q2Q1W2 868 aaKnown RBP12.76□□□□□ -0.37
CKS1B-206ENST00000474215 LRRC8DQ7L1W4 858 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 NIPA1Q7RTP0 329 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 TRIM50Q86XT4 487 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 REXO1Q8N1G1 1221 aaKnown RBP12.76□□□□□ -0.37
CKS1B-206ENST00000474215 BICD2Q8TD16 824 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 ATP6V0A1Q93050 837 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 GUCD1Q96NT3 240 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 TTYH1Q9H313 450 aaPredicted RBP12.76□□□□□ -0.37
CKS1B-206ENST00000474215 SH3GLB2Q9NR46 395 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 SETD4Q9NVD3 440 aa12.76□□□□□ -0.37
CKS1B-206ENST00000474215 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 NFASCO94856 1347 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 CYP3A4P08684 503 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 PBX2P40425 430 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 CPLX2Q6PUV4 134 aaKnown RBP12.75□□□□□ -0.37
CKS1B-206ENST00000474215 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 CRYGNQ8WXF5 182 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 GLG1Q92896 1179 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 WNT8BQ93098 351 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 TIFAQ96CG3 184 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 CDX2Q99626 313 aaPredicted RBP12.75□□□□□ -0.37
CKS1B-206ENST00000474215 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 PBX4Q9BYU1 374 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
CKS1B-206ENST00000474215 JPH1Q9HDC5 661 aaPredicted RBP12.75□□□□□ -0.37
CKS1B-206ENST00000474215 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 MSRAQ9UJ68 235 aa12.75□□□□□ -0.37
CKS1B-206ENST00000474215 NRCAMQ92823 1304 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 FAM86B1E9PN63 330 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 TREHO43280 583 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 DEXIO95424 95 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 FAM86B2P0C5J1 330 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
CKS1B-206ENST00000474215 THPOP40225 353 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 NLRP5P59047 1200 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 ITGB3BPQ13352 177 aaPredicted RBP12.74□□□□□ -0.37
CKS1B-206ENST00000474215 RAB30Q15771 203 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
CKS1B-206ENST00000474215 IGLV3-22A0A075B6J6 115 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 RSPH10B2B2RC85 870 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 NBNO60934 754 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 LGR5O75473 907 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 BAIAP3O94812 1187 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 CXCL10P02778 98 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 RSPH10BP0C881 870 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 ACTR2P61160 394 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 ADAM17P78536 824 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 FAM177A1Q8N128 213 aaPredicted RBP12.73□□□□□ -0.37
CKS1B-206ENST00000474215 PHOSPHO2Q8TCD6 241 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 SLKQ9H2G2 1235 aaPredicted RBP12.73□□□□□ -0.37
CKS1B-206ENST00000474215 AZI2Q9H6S1 392 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 CHD9Q3L8U1 2897 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 COL6A3P12111 3177 aa12.73□□□□□ -0.37
CKS1B-206ENST00000474215 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
CKS1B-206ENST00000474215 PFKFB2O60825 505 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 CAND2O75155 1236 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 CDKL5O76039 1030 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 ATG7O95352 703 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 SEC24BO95487 1268 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 MARK3P27448 753 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 CIITAP33076 1130 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 RABGGTBP53611 331 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 AK2P54819 239 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 SCRN1Q12765 414 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 MBTPS1Q14703 1052 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 GRIN2CQ14957 1233 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 CNKSR3Q6P9H4 555 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 PLPPR4Q7Z2D5 763 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 TNPO1Q92973 898 aaKnown RBP12.72□□□□□ -0.37
CKS1B-206ENST00000474215 PCYT2Q99447 389 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 PCDHA4Q9UN74 947 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
CKS1B-206ENST00000474215 ABHD14A-ACY1A0A1B0GW23 586 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 DHX15O43143 795 aaKnown RBP12.71□□□□□ -0.37
CKS1B-206ENST00000474215 CCNE2O96020 404 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 STAT5BP51692 787 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 USP11P51784 963 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 NEK4P51957 841 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 SETQ01105 290 aaPredicted RBP12.71□□□□□ -0.37
CKS1B-206ENST00000474215 PPFIA1Q13136 1202 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 IKBKEQ14164 716 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 GRIK4Q16099 956 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 GALNT17Q6IS24 598 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms