RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ATP2A2P16615 1042 aaKnown RBP21.21■□□□□ 0.99
CCDC171-206ENST00000474193 SREBF1P36956 1147 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 KCNJ6P48051 423 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 MCM2P49736 904 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 RBL2Q08999 1139 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 PGBD1Q96JS3 809 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 CDX2Q99626 313 aaPredicted RBP21.21■□□□□ 0.99
CCDC171-206ENST00000474193 PBX4Q9BYU1 374 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 RNPEPQ9H4A4 650 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 ZNF576Q9H609 170 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 AZI2Q9H6S1 392 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 SLC28A3Q9HAS3 691 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 GRXCR1A8MXD5 290 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 BAIAP3O94812 1187 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 THPOP40225 353 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 SLC17A8Q8NDX2 589 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 PHOSPHO2Q8TCD6 241 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 ZSCAN31Q96LW9 406 aaPredicted RBP21.2■□□□□ 0.98
CCDC171-206ENST00000474193 JPH1Q9HDC5 661 aaPredicted RBP21.2■□□□□ 0.98
CCDC171-206ENST00000474193 TMEM260Q9NX78 707 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 ERAP1Q9NZ08 941 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 SLC9A2Q9UBY0 812 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 TCEAL9Q9UHQ7 104 aa21.2■□□□□ 0.98
CCDC171-206ENST00000474193 EFCAB14O75071 495 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 CLK2P49760 499 aaKnown RBP21.19■□□□□ 0.98
CCDC171-206ENST00000474193 NLRP5P59047 1200 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 ARHGAP4P98171 946 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 ZNF200P98182 395 aaPredicted RBP21.19■□□□□ 0.98
CCDC171-206ENST00000474193 NTRK3Q16288 839 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 NIPA1Q7RTP0 329 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 SERINC5Q86VE9 423 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 GUCD1Q96NT3 240 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 CTAGE1Q96RT6 745 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 SLC9A7Q96T83 725 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 TTYH1Q9H313 450 aaPredicted RBP21.19■□□□□ 0.98
CCDC171-206ENST00000474193 NCOA5Q9HCD5 579 aaKnown RBP21.19■□□□□ 0.98
CCDC171-206ENST00000474193 SH3GLB2Q9NR46 395 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 SETD4Q9NVD3 440 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 NFASCO94856 1347 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 EMSYQ7Z589 1322 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 NRCAMQ92823 1304 aa21.19■□□□□ 0.98
CCDC171-206ENST00000474193 KAT6AQ92794 2004 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 RSPH10B2B2RC85 870 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 MEIS1O00470 390 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 PFKFB2O60825 505 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 CAND2O75155 1236 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 CDKL5O76039 1030 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 RSPH10BP0C881 870 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 PKN1Q16512 942 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 ZNF618Q5T7W0 954 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 CNKSR3Q6P9H4 555 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 DHX38Q92620 1227 aaKnown RBP21.18■□□□□ 0.98
CCDC171-206ENST00000474193 SH2B1Q9NRF2 756 aaPredicted RBP21.18■□□□□ 0.98
CCDC171-206ENST00000474193 PCDHA11Q9Y5I1 949 aa21.18■□□□□ 0.98
CCDC171-206ENST00000474193 GSTTP1A0A1W2PQM5 241 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 TREHO43280 583 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 DEXIO95424 95 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 CYP3A4P08684 503 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 FOSL2P15408 326 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 PBX2P40425 430 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 IKBKEQ14164 716 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 RSPH3Q86UC2 560 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 PLA2G4DQ86XP0 818 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 TRIM50Q86XT4 487 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 GAS2L1Q99501 681 aaPredicted RBP21.17■□□□□ 0.98
CCDC171-206ENST00000474193 DOCK5Q9H7D0 1870 aa21.17■□□□□ 0.98
CCDC171-206ENST00000474193 ABHD14A-ACY1A0A1B0GW23 586 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 ARP10275 920 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 SETQ01105 290 aaPredicted RBP21.16■□□□□ 0.98
CCDC171-206ENST00000474193 ME3Q16798 604 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 CYP2W1Q8TAV3 490 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 MYLIPQ8WY64 445 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 ZBED2Q9BTP6 218 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 AGO4Q9HCK5 861 aaKnown RBP21.16■□□□□ 0.98
CCDC171-206ENST00000474193 SCN5AQ14524 2016 aa21.16■□□□□ 0.98
CCDC171-206ENST00000474193 RRN3P2A6NIE6 340 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 PPFIA3O75145 1194 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 CXCL10P02778 98 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 RPLP2P05387 115 aaKnown RBP21.15■□□□□ 0.98
CCDC171-206ENST00000474193 XBP1P17861 261 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 SCRN1Q12765 414 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 PPFIA1Q13136 1202 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 TAF2Q6P1X5 1199 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 FAM177A1Q8N128 213 aaPredicted RBP21.15■□□□□ 0.98
CCDC171-206ENST00000474193 NKX2-4Q9H2Z4 354 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 TBC1D22BQ9NU19 505 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 VPS54Q9P1Q0 977 aa21.15■□□□□ 0.98
CCDC171-206ENST00000474193 LGR5O75473 907 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 MARK3P27448 753 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 HOXC8P31273 242 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 STAT5BP51692 787 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 ACTR2P61160 394 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 GRIN2CQ14957 1233 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 TRIM71Q2Q1W2 868 aaKnown RBP21.14■□□□□ 0.97
CCDC171-206ENST00000474193 FAM160B1Q5W0V3 765 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 PPP2R2DQ66LE6 453 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 PLPPR4Q7Z2D5 763 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 NECAB1Q8N987 351 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 VWCEQ96DN2 955 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms