RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
UPF3A-203ENST00000474056 SEPT1Q8WYJ6 367 aa20.47■□□□□ 0.87
UPF3A-203ENST00000474056 ZNF215Q9UL58 517 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-203ENST00000474056 SIP14410 1827 aa20.47■□□□□ 0.87
UPF3A-203ENST00000474056 TMEM265A0A087WTH1 108 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 TREHO43280 583 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 GNA11P29992 359 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 ANAPC15P60006 121 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 ZNF618Q5T7W0 954 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 TRAF7Q6Q0C0 670 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 SERINC5Q86VE9 423 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 CCDC148Q8NFR7 591 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 CRYGNQ8WXF5 182 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 ATP6V0A1Q93050 837 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 TIFAQ96CG3 184 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.87
UPF3A-203ENST00000474056 JPH1Q9HDC5 661 aaPredicted RBP20.46■□□□□ 0.87
UPF3A-203ENST00000474056 SLC9A2Q9UBY0 812 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 STXBP5LQ9Y2K9 1186 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 SLC4A7Q9Y6M7 1214 aa20.46■□□□□ 0.87
UPF3A-203ENST00000474056 LOXHD1Q8IVV2 1947 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 FAM86B1E9PN63 330 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 MEIS1O00470 390 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 CPLX1O14810 134 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 NBNO60934 754 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 FAM86B2P0C5J1 330 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 ZNF76P36508 570 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 SSRP1Q08945 709 aaKnown RBP20.45■□□□□ 0.86
UPF3A-203ENST00000474056 ITGB3BPQ13352 177 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-203ENST00000474056 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 AGO4Q9HCK5 861 aaKnown RBP20.45■□□□□ 0.86
UPF3A-203ENST00000474056 SETD4Q9NVD3 440 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 NFASCO94856 1347 aa20.45■□□□□ 0.86
UPF3A-203ENST00000474056 SEC24BO95487 1268 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 CYP3A4P08684 503 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 ACTN1P12814 892 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 SCRN1Q12765 414 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 PCYT2Q99447 389 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 CDX2Q99626 313 aaPredicted RBP20.44■□□□□ 0.86
UPF3A-203ENST00000474056 SDF4Q9BRK5 362 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 TPCN1Q9ULQ1 816 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 EMSYQ7Z589 1322 aa20.44■□□□□ 0.86
UPF3A-203ENST00000474056 IGLV3-22A0A075B6J6 115 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 DEXIO95424 95 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 CXCL10P02778 98 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 MARK3P27448 753 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 RABGGTBP53611 331 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 ADAM17P78536 824 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 MBTPS1Q14703 1052 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 NIPA1Q7RTP0 329 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 PLA2G4DQ86XP0 818 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 BICD2Q8TD16 824 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 LMBR1Q8WVP7 490 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 SH3GLB2Q9NR46 395 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 YBX2Q9Y2T7 364 aaKnown RBP20.43■□□□□ 0.86
UPF3A-203ENST00000474056 EVPLQ92817 2033 aa20.43■□□□□ 0.86
UPF3A-203ENST00000474056 DDX39AO00148 427 aaKnown RBP20.42■□□□□ 0.86
UPF3A-203ENST00000474056 LGR5O75473 907 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 PARNO95453 639 aaKnown RBP20.42■□□□□ 0.86
UPF3A-203ENST00000474056 ATP2A2P16615 1042 aaKnown RBP20.42■□□□□ 0.86
UPF3A-203ENST00000474056 THPOP40225 353 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 AK2P54819 239 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 RAB30Q15771 203 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 TCTN1Q2MV58 587 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 MCTP2Q6DN12 878 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 MYLIPQ8WY64 445 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 GLG1Q92896 1179 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 IL17RAQ96F46 866 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 AIFM3Q96NN9 605 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 UIMC1Q96RL1 719 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 NKX2-4Q9H2Z4 354 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 SMARCAD1Q9H4L7 1026 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 ZNF576Q9H609 170 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 ERAP1Q9NZ08 941 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 MSRAQ9UJ68 235 aa20.42■□□□□ 0.86
UPF3A-203ENST00000474056 GNAT1P11488 350 aa20.41■□□□□ 0.86
UPF3A-203ENST00000474056 NLRP5P59047 1200 aa20.41■□□□□ 0.86
UPF3A-203ENST00000474056 ACTR2P61160 394 aa20.41■□□□□ 0.86
UPF3A-203ENST00000474056 GRIN2CQ14957 1233 aa20.41■□□□□ 0.86
UPF3A-203ENST00000474056 CPLX2Q6PUV4 134 aaKnown RBP20.41■□□□□ 0.86
UPF3A-203ENST00000474056 SLKQ9H2G2 1235 aaPredicted RBP20.41■□□□□ 0.86
UPF3A-203ENST00000474056 NRCAMQ92823 1304 aa20.41■□□□□ 0.86
UPF3A-203ENST00000474056 EDIL3O43854 480 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 PFKFB2O60825 505 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 DTNBO60941 627 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 MYOGP15173 224 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 PPFIA1Q13136 1202 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 CNKSR3Q6P9H4 555 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 SLC9A7Q96T83 725 aa20.4■□□□□ 0.86
UPF3A-203ENST00000474056 RSPH10B2B2RC85 870 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 DHX15O43143 795 aaKnown RBP20.39■□□□□ 0.85
UPF3A-203ENST00000474056 ATG7O95352 703 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 CCNE2O96020 404 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 CTSHP09668 335 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 RSPH10BP0C881 870 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 WDR5P61964 334 aaKnown RBP20.39■□□□□ 0.85
UPF3A-203ENST00000474056 SETQ01105 290 aaPredicted RBP20.39■□□□□ 0.85
UPF3A-203ENST00000474056 NPY5RQ15761 445 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 GRIK4Q16099 956 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms