RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SMIM10L2AP0DMW4 78 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 SMIM10L2BP0DMW5 78 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 GNAT1P11488 350 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 NONOQ15233 471 aaKnown RBP eCLIP16.14■□□□□ 0.17
VAMP4-203ENST00000474047 C9orf50Q5SZB4 431 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 NSUN7Q8NE18 718 aaKnown RBP16.14■□□□□ 0.17
VAMP4-203ENST00000474047 CRYGNQ8WXF5 182 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 SH2B1Q9NRF2 756 aaPredicted RBP16.14■□□□□ 0.17
VAMP4-203ENST00000474047 TELO2Q9Y4R8 837 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 ACRP10323 421 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 FOSBP53539 338 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 EPHB4P54760 987 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 ACTR2P61160 394 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 ATP6V0A1Q93050 837 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 SCLYQ96I15 445 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 IL23AQ9NPF7 189 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 TBC1D22BQ9NU19 505 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 ERAP1Q9NZ08 941 aa16.14■□□□□ 0.17
VAMP4-203ENST00000474047 IGLV3-22A0A075B6J6 115 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 MARK3P27448 753 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 CIITAP33076 1130 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 ITGB3BPQ13352 177 aaPredicted RBP16.13■□□□□ 0.17
VAMP4-203ENST00000474047 LRIT3Q3SXY7 679 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 PSRC1Q6PGN9 363 aaPredicted RBP16.13■□□□□ 0.17
VAMP4-203ENST00000474047 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
VAMP4-203ENST00000474047 WNT8AQ9H1J5 351 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 GJB4Q9NTQ9 266 aa16.13■□□□□ 0.17
VAMP4-203ENST00000474047 BACH1O14867 736 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 JAK2O60674 1132 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 FGBP02675 491 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 FDPSP14324 419 aaKnown RBP16.12■□□□□ 0.17
VAMP4-203ENST00000474047 KRT2P35908 639 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 ZNF200P98182 395 aaPredicted RBP16.12■□□□□ 0.17
VAMP4-203ENST00000474047 PTK7Q13308 1070 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 INF2Q27J81 1249 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 DEFB128Q7Z7B8 93 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 MTIF3Q9H2K0 278 aaKnown RBP16.12■□□□□ 0.17
VAMP4-203ENST00000474047 RNPEPQ9H4A4 650 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 SAMM50Q9Y512 469 aa16.12■□□□□ 0.17
VAMP4-203ENST00000474047 FAM160B1Q5W0V3 765 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 MIS18BP1Q6P0N0 1132 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 ZNF365Q70YC5 407 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 AFAP1L1Q8TED9 768 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAMP4-203ENST00000474047 LLPHQ9BRT6 129 aaKnown RBP16.11■□□□□ 0.17
VAMP4-203ENST00000474047 FTOQ9C0B1 505 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAMP4-203ENST00000474047 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 M0R2N6 131 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 IQCF3P0C7M6 154 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 RFC2P35250 354 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 STAT5BP51692 787 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 NPY5RQ15761 445 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 LETM2Q2VYF4 491 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
VAMP4-203ENST00000474047 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 SOX1O00570 391 aaPredicted RBP16.1■□□□□ 0.17
VAMP4-203ENST00000474047 MARCH6O60337 910 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 GAS7O60861 476 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 LGR5O75473 907 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 SELPP16109 830 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 THPOP40225 353 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 HMGN5P82970 282 aaKnown RBP16.1■□□□□ 0.17
VAMP4-203ENST00000474047 KRT76Q01546 638 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 SAFBQ15424 915 aaKnown RBP eCLIP16.1■□□□□ 0.17
VAMP4-203ENST00000474047 LRRC8DQ7L1W4 858 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 C16orf59Q7L2K0 433 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 OXER1Q8TDS5 423 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 LRCH3Q96II8 777 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
VAMP4-203ENST00000474047 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
VAMP4-203ENST00000474047 DHX15O43143 795 aaKnown RBP16.09■□□□□ 0.17
VAMP4-203ENST00000474047 TREHO43280 583 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 PFKMP08237 780 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 CKBP12277 381 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 ACTN1P12814 892 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 IGBP1P78318 339 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 LRCH2Q5VUJ6 765 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 ZNF746Q6NUN9 644 aaPredicted RBP16.09■□□□□ 0.17
VAMP4-203ENST00000474047 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 CKAP2LQ8IYA6 745 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 CTAGE1Q96RT6 745 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 NAP1L4Q99733 375 aaKnown RBP16.09■□□□□ 0.17
VAMP4-203ENST00000474047 TEKT3Q9BXF9 490 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 ZNF302Q9NR11 478 aa16.09■□□□□ 0.17
VAMP4-203ENST00000474047 DDX25Q9UHL0 483 aaKnown RBP16.09■□□□□ 0.17
VAMP4-203ENST00000474047 ZBBXA8MT70 800 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms