RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SAMM50Q9Y512 469 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 NR2E3Q9Y5X4 410 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 H3BRB1 525 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 TLR3O15455 904 aaKnown RBP14.03□□□□□ -0.16
DDX56-209ENST00000473924 CHMP2AO43633 222 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 NEMFO60524 1076 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 F2P00734 622 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 MCM7P33993 719 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 TRAPPC10P48553 1259 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 TLE2Q04725 743 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 CALCRLQ16602 461 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 KIAA0753Q2KHM9 967 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 ZNF746Q6NUN9 644 aaPredicted RBP14.03□□□□□ -0.16
DDX56-209ENST00000473924 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 C7orf31Q8N865 590 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 ETNPPLQ8TBG4 499 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 KAT2BQ92831 832 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 GJA10Q969M2 543 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 C16orf70Q9BSU1 422 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 TUT1Q9H6E5 874 aaKnown RBP14.03□□□□□ -0.16
DDX56-209ENST00000473924 PRKAG2Q9UGJ0 569 aa14.03□□□□□ -0.16
DDX56-209ENST00000473924 GRIN2DO15399 1336 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 BACH1O14867 736 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 TBX3O15119 743 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 CCNE2O96020 404 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 SYT1P21579 422 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 CDK7P50613 346 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 ZNF174Q15697 407 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 TTC38Q5R3I4 469 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 FAM160B1Q5W0V3 765 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 NFRKBQ6P4R8 1299 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 TRIM50Q86XT4 487 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
DDX56-209ENST00000473924 SLFN12Q8IYM2 578 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 SLC43A3Q8NBI5 491 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 PPP1R13LQ8WUF5 828 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 TOX2Q96NM4 488 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 PRDM5Q9NQX1 630 aaPredicted RBP14.02□□□□□ -0.17
DDX56-209ENST00000473924 ALPK3Q96L96 1907 aa14.02□□□□□ -0.17
DDX56-209ENST00000473924 EMSYQ7Z589 1322 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 WDR64B1ANS9 1081 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 HAS3O00219 553 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 WNT7AO00755 349 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 PSMD10O75832 226 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 ATG7O95352 703 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 PSAPP07602 524 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 SUPT20HL2P0C7V6 817 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 SFNP31947 248 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 STAT5BP51692 787 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 JAK3P52333 1124 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 PTPN11Q06124 597 aaPredicted RBP14.01□□□□□ -0.17
DDX56-209ENST00000473924 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
DDX56-209ENST00000473924 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 ABHD15Q6UXT9 468 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 ANKRD33Q7Z3H0 272 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 UNC45AQ9H3U1 944 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 KCNMB3Q9NPA1 279 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 ERAP1Q9NZ08 941 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 NOD1Q9Y239 953 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 PCDHA10Q9Y5I2 948 aa14.01□□□□□ -0.17
DDX56-209ENST00000473924 SCN10AQ9Y5Y9 1956 aa14□□□□□ -0.17
DDX56-209ENST00000473924 STX6O43752 255 aa14□□□□□ -0.17
DDX56-209ENST00000473924 LGR5O75473 907 aa14□□□□□ -0.17
DDX56-209ENST00000473924 CLTBP09497 229 aa14□□□□□ -0.17
DDX56-209ENST00000473924 MARK3P27448 753 aa14□□□□□ -0.17
DDX56-209ENST00000473924 NBR1Q14596 966 aa14□□□□□ -0.17
DDX56-209ENST00000473924 SWSAP1Q6NVH7 229 aa14□□□□□ -0.17
DDX56-209ENST00000473924 MIER3Q7Z3K6 550 aa14□□□□□ -0.17
DDX56-209ENST00000473924 BRAPQ7Z569 592 aa14□□□□□ -0.17
DDX56-209ENST00000473924 FAM126BQ8IXS8 530 aa14□□□□□ -0.17
DDX56-209ENST00000473924 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
DDX56-209ENST00000473924 HAS1Q92839 578 aa14□□□□□ -0.17
DDX56-209ENST00000473924 ZNF302Q9NR11 478 aa14□□□□□ -0.17
DDX56-209ENST00000473924 DISC1Q9NRI5 854 aa14□□□□□ -0.17
DDX56-209ENST00000473924 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
DDX56-209ENST00000473924 HDAC6Q9UBN7 1215 aa14□□□□□ -0.17
DDX56-209ENST00000473924 PCDHA12Q9UN75 941 aa14□□□□□ -0.17
DDX56-209ENST00000473924 MKI67P46013 3256 aaKnown RBP14□□□□□ -0.17
DDX56-209ENST00000473924 B4GALT4O60513 344 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
DDX56-209ENST00000473924 SYN1P17600 705 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 TXKP42681 527 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 SLC26A2P50443 739 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 TOB1P50616 345 aaPredicted RBP13.99□□□□□ -0.17
DDX56-209ENST00000473924 FAAP100Q0VG06 881 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 PTGISQ16647 500 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 PDXDC2PQ6P474 469 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 PLPPR4Q7Z2D5 763 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 CCDC60Q8IWA6 550 aaPredicted RBP13.99□□□□□ -0.17
DDX56-209ENST00000473924 RDM1Q8NG50 284 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 TNPO1Q92973 898 aaKnown RBP13.99□□□□□ -0.17
DDX56-209ENST00000473924 PCYT2Q99447 389 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 TRPV6Q9H1D0 765 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 RNPEPQ9H4A4 650 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 TTC12Q9H892 705 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms