RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 PER2O15055 1255 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 GPAA1O43292 621 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 EIF3JO75822 258 aaKnown RBP12.35□□□□□ -0.43
SSBP1-209ENST00000473783 APPP05067 770 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 GNAT1P11488 350 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 HOXB8P17481 243 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-209ENST00000473783 NOVP48745 357 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
SSBP1-209ENST00000473783 HSDL1Q3SXM5 330 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 MYSM1Q5VVJ2 828 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 PDE12Q6L8Q7 609 aaKnown RBP12.35□□□□□ -0.43
SSBP1-209ENST00000473783 ANKRD54Q6NXT1 300 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 IFNL3Q8IZI9 196 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 DTWD2Q8NBA8 298 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 FLCNQ8NFG4 579 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 MICAL1Q8TDZ2 1067 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 RUBCNQ92622 972 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 APPBP2Q92624 585 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 SPATA33Q96N06 139 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 HINFPQ9BQA5 517 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 RTP3Q9BQQ7 232 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 NACAP1Q9BZK3 213 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
SSBP1-209ENST00000473783 C2CD4DB7Z1M9 353 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 H3BRB1 525 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 NMT2O60551 498 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 SDHBP21912 280 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 TECP42680 631 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 KCNC3Q14003 757 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 RASGRP4Q8TDF6 673 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 SYTL5Q8TDW5 730 aaPredicted RBP12.34□□□□□ -0.43
SSBP1-209ENST00000473783 NECTIN4Q96NY8 510 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 TAAR1Q96RJ0 339 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 RMDN3Q96TC7 470 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 SMOC2Q9H3U7 446 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
SSBP1-209ENST00000473783 EHMT1Q9H9B1 1298 aa12.34□□□□□ -0.43
SSBP1-209ENST00000473783 PATL2C9JE40 543 aaKnown RBP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 GHRP10912 638 aa12.33□□□□□ -0.44
SSBP1-209ENST00000473783 PPARAQ07869 468 aa12.33□□□□□ -0.44
SSBP1-209ENST00000473783 RSPO4Q2I0M5 234 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 KCNV1Q6PIU1 500 aa12.33□□□□□ -0.44
SSBP1-209ENST00000473783 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 GPCPD1Q9NPB8 672 aa12.33□□□□□ -0.44
SSBP1-209ENST00000473783 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
SSBP1-209ENST00000473783 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 FRMPD2Q68DX3 1309 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-209ENST00000473783 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-209ENST00000473783 GGPS1O95749 300 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 CHRNA1P02708 482 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-209ENST00000473783 USH1GQ495M9 461 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 KIAA0319Q5VV43 1072 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 ZC3H14Q6PJT7 736 aaKnown RBP12.32□□□□□ -0.44
SSBP1-209ENST00000473783 NPAS4Q8IUM7 802 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 ZDHHC14Q8IZN3 488 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 CRIPAKQ8N1N5 446 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 NAPBQ9H115 298 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 LOXHD1Q8IVV2 1947 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 CCDC171Q6TFL3 1326 aa12.32□□□□□ -0.44
SSBP1-209ENST00000473783 CACNA1IQ9P0X4 2223 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 PI15O43692 258 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 PPFIA3O75145 1194 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 RAB11FIP3O75154 756 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 LGALS2P05162 132 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 ASGR2P07307 311 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 ZFYP08048 801 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-209ENST00000473783 NR3C2P08235 984 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 STAG3L1P0CL83 205 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
SSBP1-209ENST00000473783 NPR3P17342 541 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 EIF2AK2P19525 551 aaKnown RBP12.31□□□□□ -0.44
SSBP1-209ENST00000473783 ADAM17P78536 824 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 ITIH3Q06033 890 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 COL9A2Q14055 689 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-209ENST00000473783 LPIN1Q14693 890 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 PAN2Q504Q3 1202 aaKnown RBP12.31□□□□□ -0.44
SSBP1-209ENST00000473783 ARHGEF16Q5VV41 709 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 CES5AQ6NT32 575 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 MCF2L2Q86YR7 1114 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 TDRD5Q8NAT2 981 aaKnown RBP12.31□□□□□ -0.44
SSBP1-209ENST00000473783 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 PCDHB12Q9Y5F1 795 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 R4GN57 208 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 DENND4AQ7Z401 1863 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 ABCB11O95342 1321 aa12.31□□□□□ -0.44
SSBP1-209ENST00000473783 FSCN2O14926 492 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms