RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 MCF2L2Q86YR7 1114 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 LINC01599Q8WXQ3 324 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 ZFP91Q96JP5 570 aaPredicted RBP18.92■□□□□ 0.62
HPS4-210ENST00000473782 TOMM22Q9NS69 142 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 TRPC6Q9Y210 931 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 MRPL42Q9Y6G3 142 aaKnown RBP18.92■□□□□ 0.62
HPS4-210ENST00000473782 TTC3P53804 2025 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 GALR2O43603 387 aaPredicted RBP18.91■□□□□ 0.62
HPS4-210ENST00000473782 HSPD1P10809 573 aaKnown RBP18.91■□□□□ 0.62
HPS4-210ENST00000473782 MS4A1P11836 297 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 NRIP1P48552 1158 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 MGAT3Q09327 533 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 BTG3Q14201 252 aaPredicted RBP18.91■□□□□ 0.62
HPS4-210ENST00000473782 PTPN21Q16825 1174 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 STOX1Q6ZVD7 989 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 ATP8B4Q8TF62 1192 aa18.91■□□□□ 0.62
HPS4-210ENST00000473782 GHRP10912 638 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 NUBP1P53384 320 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 LPIN1Q14693 890 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 RBM23Q86U06 439 aaKnown RBP18.9■□□□□ 0.62
HPS4-210ENST00000473782 KLHL23Q8NBE8 558 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 RIPOR3Q96MK2 946 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 JMJD4Q9H9V9 463 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 MRPL11Q9Y3B7 192 aaKnown RBP18.9■□□□□ 0.62
HPS4-210ENST00000473782 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
HPS4-210ENST00000473782 DMXL1Q9Y485 3027 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 CFBP00751 764 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 TGFB3P10600 412 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
HPS4-210ENST00000473782 ATF7P17544 494 aaPredicted RBP18.89■□□□□ 0.61
HPS4-210ENST00000473782 PGM5Q15124 567 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 RUFY4Q6ZNE9 571 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 RTN4RL1Q86UN2 441 aaPredicted RBP18.89■□□□□ 0.61
HPS4-210ENST00000473782 POF1BQ8WVV4 589 aa18.89■□□□□ 0.61
HPS4-210ENST00000473782 PPP1R11O60927 126 aaPredicted RBP18.88■□□□□ 0.61
HPS4-210ENST00000473782 NAALADL2Q58DX5 795 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 TRIM50Q86XT4 487 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 TBC1D10CQ8IV04 446 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 TMEM105Q8N8V8 129 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 LMBR1Q8WVP7 490 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 ZKSCAN3Q9BRR0 538 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 S1PR5Q9H228 398 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 MLXIPQ9HAP2 919 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 ZNF292O60281 2723 aa18.88■□□□□ 0.61
HPS4-210ENST00000473782 HAND2P61296 217 aa18.87■□□□□ 0.61
HPS4-210ENST00000473782 SEMA3FQ13275 785 aa18.87■□□□□ 0.61
HPS4-210ENST00000473782 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
HPS4-210ENST00000473782 KIAA1671Q9BY89 1806 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 PER2O15055 1255 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 ID4P47928 161 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 KCNC3Q14003 757 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 DGKHQ86XP1 1220 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 PPP2R3CQ969Q6 453 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 GPR20Q99678 358 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 USP26Q9BXU7 913 aa18.86■□□□□ 0.61
HPS4-210ENST00000473782 AGO3Q9H9G7 860 aaKnown RBP18.86■□□□□ 0.61
HPS4-210ENST00000473782 NEDD4P46934 1319 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 GNAT1P11488 350 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 HOXA13P31271 388 aaPredicted RBP18.85■□□□□ 0.61
HPS4-210ENST00000473782 ARHGAP4P98171 946 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 FBXO47Q5MNV8 452 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 CMTR2Q8IYT2 770 aaKnown RBP18.85■□□□□ 0.61
HPS4-210ENST00000473782 PNMA1Q8ND90 353 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 VAT1LQ9HCJ6 419 aa18.85■□□□□ 0.61
HPS4-210ENST00000473782 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
HPS4-210ENST00000473782 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
HPS4-210ENST00000473782 KDM4AO75164 1064 aa18.84■□□□□ 0.61
HPS4-210ENST00000473782 ARP10275 920 aa18.84■□□□□ 0.61
HPS4-210ENST00000473782 MRPS9P82933 396 aaKnown RBP18.84■□□□□ 0.61
HPS4-210ENST00000473782 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
HPS4-210ENST00000473782 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
HPS4-210ENST00000473782 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
HPS4-210ENST00000473782 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.61
HPS4-210ENST00000473782 A0A0D9SFI3 127 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 GATMP50440 423 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 DUSP6Q16828 381 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 SYCE2Q6PIF2 218 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 METTL7BQ6UX53 244 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 MFSD6Q6ZSS7 791 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 CYFIP1Q7L576 1253 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 FRMD5Q7Z6J6 570 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.6
HPS4-210ENST00000473782 MIER1Q8N108 512 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 SMOC2Q9H3U7 446 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 TLE6Q9H808 572 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
HPS4-210ENST00000473782 MAP3K20Q9NYL2 800 aaKnown RBP18.83■□□□□ 0.6
HPS4-210ENST00000473782 PLXNA4Q9HCM2 1894 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 ZFHX4Q86UP3 3567 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 SPATA31C2B4DYI2 1134 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 ERVFC1P60507 584 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 SLC35G1Q2M3R5 365 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 PAN2Q504Q3 1202 aaKnown RBP18.82■□□□□ 0.6
HPS4-210ENST00000473782 ASPRV1Q53RT3 343 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 MARCH8Q5T0T0 291 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 TMEM184AQ6ZMB5 413 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms