RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 GOLGA8BA8MQT2 603 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 ZBTB43O43298 467 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 CDC45O75419 566 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 UPP2O95045 317 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 GNAT1P11488 350 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 CPA1P15085 419 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 ITGB5P18084 799 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 TFF2Q03403 129 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 GRB10Q13322 594 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 MTMR1Q13613 665 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 XRRA1Q6P2D8 792 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-217ENST00000473720 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
SMPD4-217ENST00000473720 GPRASP2Q96D09 838 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 ASB2Q96Q27 587 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 OSBPL7Q9BZF2 842 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
SMPD4-217ENST00000473720 RBM28Q9NW13 759 aaKnown RBP13.7□□□□□ -0.22
SMPD4-217ENST00000473720 EFCAB14O75071 495 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 GJB5O95377 273 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 AMHP03971 560 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 KCNA2P16389 499 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
SMPD4-217ENST00000473720 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 GLG1Q92896 1179 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 CDHR1Q96JP9 859 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 RAD9AQ99638 391 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
SMPD4-217ENST00000473720 V9GY48 417 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-217ENST00000473720 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 HOXC8P31273 242 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 IGBP1P78318 339 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 EXOSC10Q01780 885 aaKnown RBP13.68□□□□□ -0.22
SMPD4-217ENST00000473720 PLEKHG4Q58EX7 1191 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 SEPT8Q92599 483 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 TMEM260Q9NX78 707 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 UBIAD1Q9Y5Z9 338 aa13.68□□□□□ -0.22
SMPD4-217ENST00000473720 LINC01553A4QN01 128 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 TNFRSF10AO00220 468 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 CDC27P30260 824 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 KCNQ1P51787 676 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 ADCY7P51828 1080 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 PPFIA1Q13136 1202 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 KRT32Q14532 448 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 ZBTB10Q96DT7 871 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 CCDC136Q96JN2 1154 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
SMPD4-217ENST00000473720 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 TGS1Q96RS0 853 aaKnown RBP13.67□□□□□ -0.22
SMPD4-217ENST00000473720 JADE2Q9NQC1 790 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 TRANK1O15050 2925 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 TTC3P53804 2025 aa13.67□□□□□ -0.22
SMPD4-217ENST00000473720 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 BRWD1Q9NSI6 2320 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
SMPD4-217ENST00000473720 STXBP3O00186 592 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 LPXNO60711 386 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 GHRP10912 638 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 ZNF76P36508 570 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMPD4-217ENST00000473720 GRIK4Q16099 956 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 Q6ZUG5 572 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 DNAJB3Q8WWF6 145 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-217ENST00000473720 UHRF1Q96T88 793 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-217ENST00000473720 YME1L1Q96TA2 773 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 C17orf80Q9BSJ5 609 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
SMPD4-217ENST00000473720 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-217ENST00000473720 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 TUBE1Q9UJT0 475 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 INSL6Q9Y581 213 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 MYO7AQ13402 2215 aa13.66□□□□□ -0.22
SMPD4-217ENST00000473720 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-217ENST00000473720 CAND2O75155 1236 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 CHRNA1P02708 482 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 ARP10275 920 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 ADD1P35611 737 aaKnown RBP13.65□□□□□ -0.22
SMPD4-217ENST00000473720 ADAM17P78536 824 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 364.8 ms