RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 SPRED2Q7Z698 418 aa22.39■■□□□ 1.17
APTX-218ENST00000473270 GPKOWQ92917 476 aaPredicted RBP eCLIP22.39■■□□□ 1.17
APTX-218ENST00000473270 SENP7Q9BQF6 1050 aa22.39■■□□□ 1.17
APTX-218ENST00000473270 UBE2ZQ9H832 354 aaPredicted RBP22.39■■□□□ 1.17
APTX-218ENST00000473270 ZSWIM6Q9HCJ5 1215 aa22.39■■□□□ 1.17
APTX-218ENST00000473270 SETD4Q9NVD3 440 aa22.39■■□□□ 1.17
APTX-218ENST00000473270 CYTH3O43739 400 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 RPS6KB1P23443 525 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 EXOSC10Q01780 885 aaKnown RBP22.38■■□□□ 1.17
APTX-218ENST00000473270 TIGD5Q53EQ6 642 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 TRAF7Q6Q0C0 670 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 RUFY3Q7L099 469 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 GPR20Q99678 358 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 SPZ1Q9BXG8 430 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 IFIH1Q9BYX4 1025 aaKnown RBP22.38■■□□□ 1.17
APTX-218ENST00000473270 EHMT1Q9H9B1 1298 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 NCOR1O75376 2440 aa22.38■■□□□ 1.17
APTX-218ENST00000473270 NRCAMQ92823 1304 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 CALM1P0DP23 149 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 CALM2P0DP24 149 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 CALM3P0DP25 149 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 SMARCA1P28370 1054 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 MRPS9P82933 396 aaKnown RBP22.37■■□□□ 1.17
APTX-218ENST00000473270 TCTN1Q2MV58 587 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 TMEM31Q5JXX7 168 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 ZNF654Q8IZM8 581 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 IGDCC4Q8TDY8 1250 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 MRPL38Q96DV4 380 aaKnown RBP22.37■■□□□ 1.17
APTX-218ENST00000473270 IL17RAQ96F46 866 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 C17orf80Q9BSJ5 609 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 FAM50BQ9Y247 325 aa22.37■■□□□ 1.17
APTX-218ENST00000473270 FRMPD4Q14CM0 1322 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 KCNA5P22460 613 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 HTRA4P83105 476 aaPredicted RBP22.36■■□□□ 1.17
APTX-218ENST00000473270 HIC1Q14526 733 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 PUS10Q3MIT2 529 aaKnown RBP22.36■■□□□ 1.17
APTX-218ENST00000473270 USP17L6PQ6QN14 398 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 EP400NLQ6ZTU2 488 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 TNPO1Q92973 898 aaKnown RBP22.36■■□□□ 1.17
APTX-218ENST00000473270 TOP1MTQ969P6 601 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 PSTPIP2Q9H939 334 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 REV3LO60673 3130 aa22.36■■□□□ 1.17
APTX-218ENST00000473270 SPDYE3A6NKU9 549 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 PIK3CDO00329 1044 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 SH2B2O14492 632 aaPredicted RBP22.35■■□□□ 1.17
APTX-218ENST00000473270 SSTR3P32745 418 aaPredicted RBP22.35■■□□□ 1.17
APTX-218ENST00000473270 LIFRP42702 1097 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 GPM6BQ13491 265 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 EPC2Q52LR7 807 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 TAF2Q6P1X5 1199 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 GLG1Q92896 1179 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 TBC1D32Q96NH3 1257 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 SENP2Q9HC62 589 aa22.35■■□□□ 1.17
APTX-218ENST00000473270 COL4A4P53420 1690 aaPredicted RBP22.34■■□□□ 1.17
APTX-218ENST00000473270 RPLP2P05387 115 aaKnown RBP22.34■■□□□ 1.17
APTX-218ENST00000473270 CPA1P15085 419 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 HOXC8P31273 242 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 SYNE3Q6ZMZ3 975 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 Q6ZUG5 572 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 TRIM50Q86XT4 487 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 GPRASP2Q96D09 838 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 LRRC2Q9BYS8 371 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 UPF3BQ9BZI7 483 aaKnown RBP22.34■■□□□ 1.17
APTX-218ENST00000473270 LY9Q9HBG7 655 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 PDRG1Q9NUG6 133 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 ERAP1Q9NZ08 941 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 RAPGEFL1Q9UHV5 662 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 RWDD3Q9Y3V2 267 aa22.34■■□□□ 1.17
APTX-218ENST00000473270 TCF7P36402 384 aaPredicted RBP22.33■■□□□ 1.17
APTX-218ENST00000473270 PLA2G5P39877 138 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 SLC35G1Q2M3R5 365 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 LEXMQ3ZCV2 418 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 TMEM192Q8IY95 271 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 FIBCD1Q8N539 461 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 SP7Q8TDD2 431 aaPredicted RBP22.33■■□□□ 1.17
APTX-218ENST00000473270 LMBR1Q8WVP7 490 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 SEPT1Q8WYJ6 367 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 MYL10Q9BUA6 226 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 BCAS3Q9H6U6 928 aa22.33■■□□□ 1.17
APTX-218ENST00000473270 PTPRSQ13332 1948 aa22.32■■□□□ 1.16
APTX-218ENST00000473270 PPFIA1Q13136 1202 aa22.32■■□□□ 1.16
APTX-218ENST00000473270 MTMR1Q13613 665 aa22.32■■□□□ 1.16
APTX-218ENST00000473270 BANK1Q8NDB2 785 aa22.32■■□□□ 1.16
APTX-218ENST00000473270 EPHX3Q9H6B9 360 aa22.32■■□□□ 1.16
APTX-218ENST00000473270 SLC12A7Q9Y666 1083 aa22.32■■□□□ 1.16
APTX-218ENST00000473270 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.31■■□□□ 1.16
APTX-218ENST00000473270 H3BNC9 293 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 M0QZ92 97 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 MAFGO15525 162 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 NCK2O43639 380 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 COL9A3Q14050 684 aaPredicted RBP22.31■■□□□ 1.16
APTX-218ENST00000473270 PTCRAQ6ISU1 281 aaPredicted RBP22.31■■□□□ 1.16
APTX-218ENST00000473270 SGMS1Q86VZ5 419 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 FBXL16Q8N461 479 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 SMARCAD1Q9H4L7 1026 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 AZI2Q9H6S1 392 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 TUBE1Q9UJT0 475 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 SIP14410 1827 aa22.31■■□□□ 1.16
APTX-218ENST00000473270 BAZ2BQ9UIF8 2168 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms