RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 KRT14P02533 472 aa23.24■■□□□ 1.31
COL18A1-207ENST00000473212 SERPING1P05155 500 aa23.24■■□□□ 1.31
COL18A1-207ENST00000473212 ATP2B4P23634 1241 aa23.24■■□□□ 1.31
COL18A1-207ENST00000473212 CLK2P49760 499 aaKnown RBP23.24■■□□□ 1.31
COL18A1-207ENST00000473212 GUCY2DQ02846 1103 aa23.24■■□□□ 1.31
COL18A1-207ENST00000473212 PROM2Q8N271 834 aa23.24■■□□□ 1.31
COL18A1-207ENST00000473212 FAM163AQ96GL9 167 aaPredicted RBP23.24■■□□□ 1.31
COL18A1-207ENST00000473212 PCDHA12Q9UN75 941 aa23.24■■□□□ 1.31
COL18A1-207ENST00000473212 PNMA6FA0A0J9YX94 578 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 MICALL1Q8N3F8 863 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 CCDC43Q96MW1 224 aaKnown RBP23.23■■□□□ 1.31
COL18A1-207ENST00000473212 GOLPH3Q9H4A6 298 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 GDF3Q9NR23 364 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 FAM169AQ9Y6X4 670 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 SHTN1A0MZ66 631 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 KLRC1P26715 233 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 CASP5P51878 434 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 PDCLQ13371 301 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 TRADDQ15628 312 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 VPS72Q15906 364 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 TBC1D5Q92609 795 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 LRRC27Q9C0I9 530 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 PCDHAC2Q9Y5I4 1007 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 TAF1LQ8IZX4 1826 aa23.23■■□□□ 1.31
COL18A1-207ENST00000473212 FAM170AA1A519 330 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 SHMT1P34896 483 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 NNTQ13423 1086 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 CRY2Q49AN0 593 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 P2RX7Q99572 595 aaKnown RBP23.22■■□□□ 1.31
COL18A1-207ENST00000473212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.22■■□□□ 1.31
COL18A1-207ENST00000473212 SAMM50Q9Y512 469 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 A0A087X0T9 212 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 TTLL1O95922 423 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 SERPINB2P05120 415 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 FAM228BP0C875 321 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 ACTN1P12814 892 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 ATP1A2P50993 1020 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 NFIAQ12857 509 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 NAB2Q15742 525 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 FAM133AQ8N9E0 248 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 SCFD1Q8WVM8 642 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 FAM107BQ9H098 131 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 RNF14Q9UBS8 474 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 ATP6V0A2Q9Y487 856 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 PCDHA2Q9Y5H9 948 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
COL18A1-207ENST00000473212 POTEFA5A3E0 1075 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 POTEIP0CG38 1075 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 GUCY2FP51841 1108 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 CACNB3P54284 484 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 SKOR1P84550 965 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 RAPGEF1Q13905 1077 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 HERC4Q5GLZ8 1057 aaPredicted RBP23.21■■□□□ 1.31
COL18A1-207ENST00000473212 PPP4R3AQ6IN85 833 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 POTEGQ6S5H5 508 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 POTEEQ6S8J3 1075 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 GPBP1Q86WP2 473 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 KRT12Q99456 494 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 PSTPIP2Q9H939 334 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 ADAMTS1Q9UHI8 967 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 MEIS1O00470 390 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 CFAP58Q5T655 872 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 SYN2Q92777 582 aaPredicted RBP23.21■■□□□ 1.31
COL18A1-207ENST00000473212 CUL5Q93034 780 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 NUCKS1Q9H1E3 243 aaKnown RBP23.21■■□□□ 1.31
COL18A1-207ENST00000473212 SERPINB13Q9UIV8 391 aa23.21■■□□□ 1.31
COL18A1-207ENST00000473212 MED24O75448 989 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 CPP00450 1065 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 PLA2G4BP0C869 781 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 GYS1P13807 737 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 LIG3P49916 1009 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 PSMC6P62333 389 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 ZNF233A6NK53 670 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 hCG_1984214I3L0E3 225 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 PAK2Q13177 524 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 ARSHQ5FYA8 562 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 IQCKQ8N0W5 287 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 ZNF713Q8N859 430 aaPredicted RBP23.2■■□□□ 1.3
COL18A1-207ENST00000473212 LUC7LQ9NQ29 371 aaKnown RBP23.2■■□□□ 1.3
COL18A1-207ENST00000473212 PLIN4Q96Q06 1357 aa23.2■■□□□ 1.3
COL18A1-207ENST00000473212 SLC18A3Q16572 532 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 KIAA0753Q2KHM9 967 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 MEI1Q5TIA1 1274 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 ARHGAP27Q6ZUM4 889 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 CASKIN2Q8WXE0 1202 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 USP40Q9NVE5 1235 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.19■■□□□ 1.3
COL18A1-207ENST00000473212 CYP11B2P19099 503 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 FOXR2Q6PJQ5 311 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 SLC30A10Q6XR72 485 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 TRIM59Q8IWR1 403 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 PROCA1Q8NCQ7 364 aaPredicted RBP23.19■■□□□ 1.3
COL18A1-207ENST00000473212 KCTD10Q9H3F6 313 aa23.19■■□□□ 1.3
COL18A1-207ENST00000473212 ZBTB5O15062 677 aa23.18■■□□□ 1.3
COL18A1-207ENST00000473212 TOM1O60784 492 aa23.18■■□□□ 1.3
COL18A1-207ENST00000473212 DDR1Q08345 913 aa23.18■■□□□ 1.3
COL18A1-207ENST00000473212 KLHL30Q0D2K2 578 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms