RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SEMA5AQ13591 1074 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 SCARF1Q14162 830 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 IFI16Q16666 785 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 LIN54Q6MZP7 749 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 GPAT2Q6NUI2 795 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 NPNTQ6UXI9 565 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 NLRP10Q86W26 655 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 NPAS3Q8IXF0 933 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 DZIP1LQ8IYY4 767 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZSCAN18Q8TBC5 510 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 SH3RF2Q8TEC5 729 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ATXN2LQ8WWM7 1075 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 HPS3Q969F9 1004 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 SKA1Q96BD8 255 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 EAF2Q96CJ1 260 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 RIPOR3Q96MK2 946 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 CAMKK2Q96RR4 588 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 IFT80Q9P2H3 777 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 B4GALT6Q9UBX8 382 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ADAM30Q9UKF2 790 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 JAG2Q9Y219 1238 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ACTL7BQ9Y614 415 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 SIN3BO75182 1162 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 LEFTY1O75610 366 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CD4P01730 458 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 ITGA4P13612 1032 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CEBPAP49715 358 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 AK2P54819 239 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 ALDH6A1Q02252 535 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 ID3Q02535 119 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 TRIM25Q14258 630 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 C1QTNF12Q5T7M4 302 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 LETMD1Q6P1Q0 360 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 SHISA2Q6UWI4 295 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 LBX2Q6XYB7 198 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 DYMQ7RTS9 669 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 OR2C3Q8N628 320 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 AIFM3Q96NN9 605 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 SORBS1Q9BX66 1292 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 CELF4Q9BZC1 486 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 WDR12Q9GZL7 423 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 OSBPL5Q9H0X9 879 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 ZMAT3Q9HA38 289 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 TOMM22Q9NS69 142 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 RAD18Q9NS91 495 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 EVLQ9UI08 416 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 ZKSCAN5Q9Y2L8 839 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 DAGLAQ9Y4D2 1042 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CTDP1Q9Y5B0 961 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 SCINQ9Y6U3 715 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 TOP2AP11388 1531 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 KIAA0586Q9BVV6 1533 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PPP1R11O60927 126 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 EFCAB14O75071 495 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 NDUFS2O75306 463 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 NPTXRO95502 500 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CPP00450 1065 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 SCG5P05408 212 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CKMT1AP12532 417 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 LSSP48449 732 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 AMPD2Q01433 879 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 LAMC2Q13753 1193 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 KIR3DS1Q14943 382 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 HSF5Q4G112 596 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 PITRM1Q5JRX3 1037 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 ZBTB41Q5SVQ8 909 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 MAMDC2Q7Z304 686 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 DDX53Q86TM3 631 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 PDILTQ8N807 584 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 KLHL23Q8NBE8 558 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 RNF214Q8ND24 703 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 TRIM52Q96A61 297 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PPP1R16BQ96T49 567 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CSRNP2Q9H175 543 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 VPS11Q9H270 941 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 KRT82Q9NSB4 513 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 USP19O94966 1318 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 C2orf71A6NGG8 1288 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 TRIM75PA6NK02 468 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PRRT4C9JH25 899 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 FANCGO15287 622 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 FKTNO75072 461 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 UBXN7O94888 489 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 POLBP06746 335 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 RAB6AP20340 208 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PDCP20941 246 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PDIA3P30101 505 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 PPM1AP35813 382 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PIP4K2BP78356 416 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 IRF9Q00978 393 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 IL10RAQ13651 578 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 MAPRE1Q15691 268 aaKnown RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 TMEM240Q5SV17 173 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 GJC2Q5T442 439 aaPredicted RBP3.26□□□□□ -1.89
XRN1-210ENST00000472697 ZNF280DQ6N043 979 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 LYSMD2Q8IV50 215 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 OR2I1PQ8NGU4 316 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CCT6BQ92526 530 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 DPF3Q92784 378 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms