RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SCFD1Q8WVM8 642 aa11.74□□□□□ -0.53
APLF-204ENST00000471727 BAP1Q92560 729 aa11.74□□□□□ -0.53
APLF-204ENST00000471727 RUBCNQ92622 972 aa11.74□□□□□ -0.53
APLF-204ENST00000471727 ALS2CR12Q96Q35 445 aa11.74□□□□□ -0.53
APLF-204ENST00000471727 IFIH1Q9BYX4 1025 aaKnown RBP11.74□□□□□ -0.53
APLF-204ENST00000471727 ANKZF1Q9H8Y5 726 aa11.74□□□□□ -0.53
APLF-204ENST00000471727 FAM207AQ9NSI2 230 aaPredicted RBP11.74□□□□□ -0.53
APLF-204ENST00000471727 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
APLF-204ENST00000471727 TARSL2A2RTX5 802 aaKnown RBP11.73□□□□□ -0.53
APLF-204ENST00000471727 YDJCA8MPS7 323 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 ABL1P00519 1130 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 SERPING1P05155 500 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 ANXA13P27216 316 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 EPS15P42566 896 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 KIF11P52732 1056 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 ITIH3Q06033 890 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 KNOP1Q1ED39 458 aaKnown RBP11.73□□□□□ -0.53
APLF-204ENST00000471727 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 CCDC70Q6NSX1 233 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 HDXQ7Z353 690 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 SAMD3Q8N6K7 520 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 AGBL3Q8NEM8 1001 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 EEF2KMTQ96G04 330 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 GMLQ99445 158 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
APLF-204ENST00000471727 ACBD3Q9H3P7 528 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 GINM1Q9NU53 330 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 ARHGAP20Q9P2F6 1191 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
APLF-204ENST00000471727 SEL1LQ9UBV2 794 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 FEM1BQ9UK73 627 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
APLF-204ENST00000471727 MYH7BA7E2Y1 1941 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 LRRC53A6NM62 1247 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 FAM86B1E9PN63 330 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 RBAK-RBAKDNI3L0D1 243 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 EIF3DO15371 548 aaKnown RBP eCLIP11.72□□□□□ -0.53
APLF-204ENST00000471727 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 FAM86B2P0C5J1 330 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 SLURP2P0DP57 97 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 EIF4A3P38919 411 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 MAGEA1P43355 309 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 PLA2G4AP47712 749 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 KCNMA1Q12791 1236 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 TERF2Q15554 542 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 NFIL3Q16649 462 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 LONRF2Q1L5Z9 754 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 SFMBT2Q5VUG0 894 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 STXBP4Q6ZWJ1 553 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 EPM2AIP1Q7L775 607 aaPredicted RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 KRT26Q7Z3Y9 468 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 EIF2AK1Q9BQI3 630 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 WDR11Q9BZH6 1224 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 VCPKMTQ9H867 229 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 OLFML3Q9NRN5 406 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 TYW1Q9NV66 732 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 PNMA2Q9UL42 364 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 BZW2Q9Y6E2 419 aaKnown RBP11.72□□□□□ -0.53
APLF-204ENST00000471727 UBE4BO95155 1302 aa11.72□□□□□ -0.53
APLF-204ENST00000471727 IGLV3-22A0A075B6J6 115 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 MAP2K7O14733 419 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 OPLAHO14841 1288 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 C21orf2O43822 256 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.53
APLF-204ENST00000471727 STAT3P40763 770 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 MAP3K10Q02779 954 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 SHROOM1Q2M3G4 852 aaPredicted RBP11.71□□□□□ -0.53
APLF-204ENST00000471727 ASTE1Q2TB18 679 aaPredicted RBP11.71□□□□□ -0.53
APLF-204ENST00000471727 FAM83BQ5T0W9 1011 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 GJA10Q969M2 543 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 P2RX7Q99572 595 aaKnown RBP11.71□□□□□ -0.53
APLF-204ENST00000471727 FUT8Q9BYC5 575 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 RNF14Q9UBS8 474 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 TRIM10Q9UDY6 481 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms